RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 VPS50Q96JG6 964 aa17.73■□□□□ 0.43
LAMP1-203ENST00000472564 KLHL4Q9C0H6 718 aa17.73■□□□□ 0.43
LAMP1-203ENST00000472564 DDX28Q9NUL7 540 aaKnown RBP17.73■□□□□ 0.43
LAMP1-203ENST00000472564 PCYOX1Q9UHG3 505 aa17.73■□□□□ 0.43
LAMP1-203ENST00000472564 SPATA31D1Q6ZQQ2 1576 aa17.73■□□□□ 0.43
LAMP1-203ENST00000472564 IQCA1LA6NCM1 817 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 F8VP50 259 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 SLC34A1Q06495 639 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 PTK2BQ14289 1009 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 MAPRE1Q15691 268 aaKnown RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 CNGA2Q16280 664 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 KATNAL2Q8IYT4 538 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 PRELID2Q8N945 189 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 OXNAD1Q96HP4 312 aaPredicted RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 IDI2Q9BXS1 227 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 GEMIN8Q9NWZ8 242 aaKnown RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 BTNL10A8MVZ5 291 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 STX7O15400 261 aaKnown RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 ZSCAN5DPP0CG00 497 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 ELF3P78545 371 aaPredicted RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 C10orf120Q5SQS8 335 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 IYDQ6PHW0 289 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 CKAP2Q8WWK9 683 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 CPB2Q96IY4 423 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 APOL5Q9BWW9 433 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 BARX2Q9UMQ3 279 aaPredicted RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 ASTN1O14525 1302 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 FAAP100Q0VG06 881 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 RBBP8Q99708 897 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 ARMCX1Q9P291 453 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 LRCH1Q9Y2L9 728 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 SERPINE1P05121 402 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 DRG2P55039 364 aaKnown RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 TBL3Q12788 808 aaKnown RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 FBXO16Q8IX29 292 aaPredicted RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 ZBTB45Q96K62 511 aaPredicted RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 PARK7Q99497 189 aaKnown RBP17.72■□□□□ 0.43
LAMP1-203ENST00000472564 TCF7L2Q9NQB0 619 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 THAP1Q9NVV9 213 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 IL1RAPL1Q9NZN1 696 aa17.72■□□□□ 0.43
LAMP1-203ENST00000472564 SLC2A3P11169 496 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 FUT2Q10981 343 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 ELMSAN1Q6PJG2 1045 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 ZPBP2Q6X784 338 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 ZFPM1Q8IX07 1006 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 RPRD1AQ96P16 312 aaPredicted RBP17.71■□□□□ 0.43
LAMP1-203ENST00000472564 THUMPD3Q9BV44 507 aaKnown RBP17.71■□□□□ 0.43
LAMP1-203ENST00000472564 ABI2Q9NYB9 513 aaPredicted RBP17.71■□□□□ 0.43
LAMP1-203ENST00000472564 CLPTM1O96005 669 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 HLA-DPA1P20036 260 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 GP5P40197 560 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 NDST1P52848 882 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 RHBDL3P58872 404 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 CCDC85BQ15834 202 aaPredicted RBP17.71■□□□□ 0.43
LAMP1-203ENST00000472564 GNASQ5JWF2 1037 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 BRSK2Q8IWQ3 736 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 ADGRF2Q8IZF7 708 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 TDRD5Q8NAT2 981 aaKnown RBP17.71■□□□□ 0.43
LAMP1-203ENST00000472564 SLITRK1Q96PX8 696 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 KIAA1683Q9H0B3 1180 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 RIC1Q4ADV7 1423 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 EVPLLA8MZ36 301 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 CYB561D2O14569 222 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 OR1G1P47890 313 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 CACNA2D1P54289 1103 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 BST2Q10589 180 aaKnown RBP17.71■□□□□ 0.43
LAMP1-203ENST00000472564 FAM83AQ86UY5 434 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 TRIM45Q9H8W5 580 aaPredicted RBP17.71■□□□□ 0.43
LAMP1-203ENST00000472564 TRPC7Q9HCX4 862 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 UBP1Q9NZI7 540 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 VANGL2Q9ULK5 521 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 VPS9D1Q9Y2B5 631 aa17.71■□□□□ 0.43
LAMP1-203ENST00000472564 DPYSL4O14531 572 aa17.71■□□□□ 0.42
LAMP1-203ENST00000472564 HNRNPRO43390 633 aaKnown RBP17.71■□□□□ 0.42
LAMP1-203ENST00000472564 CYBBP04839 570 aa17.71■□□□□ 0.42
LAMP1-203ENST00000472564 EIF4BP23588 611 aaKnown RBP17.71■□□□□ 0.42
LAMP1-203ENST00000472564 MIPP30301 263 aa17.71■□□□□ 0.42
LAMP1-203ENST00000472564 CDH8P55286 799 aa17.71■□□□□ 0.42
LAMP1-203ENST00000472564 LRRC74AQ0VAA2 488 aa17.71■□□□□ 0.42
LAMP1-203ENST00000472564 GRIK5Q16478 980 aa17.71■□□□□ 0.42
LAMP1-203ENST00000472564 STK32AQ8WU08 396 aa17.71■□□□□ 0.42
LAMP1-203ENST00000472564 PRPF4O43172 522 aaKnown RBP eCLIP17.7■□□□□ 0.423e-16■■□□□ 13.9
LAMP1-203ENST00000472564 CLK1P49759 484 aaKnown RBP17.7■□□□□ 0.42
LAMP1-203ENST00000472564 MICU2Q8IYU8 434 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 SAR1AQ9NR31 198 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 GGA2Q9UJY4 613 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 LSM7Q9UK45 103 aaKnown RBP17.7■□□□□ 0.42
LAMP1-203ENST00000472564 PRG3Q9Y2Y8 225 aaPredicted RBP17.7■□□□□ 0.42
LAMP1-203ENST00000472564 MEIS2O14770 477 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 MARCKSL1P49006 195 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 IRF2BP2Q7Z5L9 587 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 KYQ8NBH2 561 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 CEP41Q9BYV8 373 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 SCN3BQ9NY72 215 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 APOC4-APOC2K7ER74 178 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 APOC2P02655 101 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 SLC1A6P48664 564 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 SNX17Q15036 470 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 ADRM1Q16186 407 aa17.7■□□□□ 0.42
LAMP1-203ENST00000472564 FUT11Q495W5 492 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms