RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 Q8N1X5 172 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 GALNT15Q8N3T1 639 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 FSTL5Q8N475 847 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-209ENST00000472044 MYRIPQ8NFW9 859 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 OTUD7AQ8TE49 926 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-209ENST00000472044 XAGE5Q8WWM1 108 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 CAVIN3Q969G5 261 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 PAAF1Q9BRP4 392 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 DPCDQ9BVM2 203 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-209ENST00000472044 LUZP4Q9P127 313 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 LRIT1Q9P2V4 623 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 SALL3Q9BXA9 1300 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 POLR2AP24928 1970 aaKnown RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 PNMA6EA0A0J9YXQ4 647 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 J3KTA2 159 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 SPRY2O43597 315 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 DNPH1O43598 174 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 FZD7O75084 574 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 DHRS4L1P0CG22 281 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 TMEM225BP0DP42 221 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 HSD3B1P14060 373 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 KRT4P19013 534 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 TACR2P21452 398 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 CTGFP29279 349 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 CCT5P48643 541 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 DGKQP52824 942 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 TPTEP56180 551 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 EIF4A1P60842 406 aaKnown RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 SUMO2P61956 95 aaKnown RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 PRKG1Q13976 671 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 CSHL1Q14406 222 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 ZNF169Q14929 603 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 TBC1D25Q3MII6 688 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 JMJD6Q6NYC1 403 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 PEG10Q86TG7 708 aaKnown RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 TTC30AQ86WT1 665 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 CLASRPQ8N2M8 674 aaKnown RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 SIRT6Q8N6T7 355 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 C11orf44Q8N8P7 122 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 BEND2Q8NDZ0 799 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 OR1N1Q8NGS0 311 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 ACTRT2Q8TDY3 377 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 WDR60Q8WVS4 1066 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 PPM1EQ8WY54 764 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 OVCA2Q8WZ82 227 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 TBC1D20Q96BZ9 403 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 WDYHV1Q96HA8 205 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 SCLT1Q96NL6 688 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 PRR25Q96S07 402 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 THAP7Q9BT49 309 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 PAGR1Q9BTK6 254 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 DDX23Q9BUQ8 820 aaKnown RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 SORBS1Q9BX66 1292 aaKnown RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 ALG13Q9NP73 1137 aaKnown RBP4.45□□□□□ -1.7
PTCD3-209ENST00000472044 FSCN3Q9NQT6 498 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 PRDM8Q9NQV8 689 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 DUSP22Q9NRW4 184 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 DLL3Q9NYJ7 618 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 LPAR3Q9UBY5 353 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 GPR52Q9Y2T5 361 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 PCDHGB3Q9Y5G1 929 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 DGKBQ9Y6T7 804 aa4.45□□□□□ -1.7
PTCD3-209ENST00000472044 GXYLT2A0PJZ3 443 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 GCOM1H8Y6P7 765 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-209ENST00000472044 IPO5O00410 1097 aaKnown RBP4.44□□□□□ -1.7
PTCD3-209ENST00000472044 FOXN1O15353 648 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 ORC4O43929 436 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 TAF5LO75529 589 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 FAM155BO75949 473 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 USP1O94782 785 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 TTLL1O95922 423 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 LMNAP02545 664 aaKnown RBP4.44□□□□□ -1.7
PTCD3-209ENST00000472044 ELFN1P0C7U0 828 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 MYCLP12524 364 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-209ENST00000472044 RARRES1P49788 294 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 CDK7P50613 346 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 PNLIPRP1P54315 467 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 PDE1AP54750 535 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 ARL4CP56559 192 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 PPFIA1Q13136 1202 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 PUM1Q14671 1186 aaKnown RBP eCLIP4.44□□□□□ -1.7
PTCD3-209ENST00000472044 GRM4Q14833 912 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 POSTNQ15063 836 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 AASDHQ4L235 1098 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-209ENST00000472044 AARS2Q5JTZ9 985 aaKnown RBP4.44□□□□□ -1.7
PTCD3-209ENST00000472044 HECTD2Q5U5R9 776 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 FAM90A2PQ658T7 463 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 MSANTD2Q6P1R3 559 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 KLHL17Q6TDP4 642 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 RFX8Q6ZV50 586 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 PTCHD4Q6ZW05 846 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 SLC44A2Q8IWA5 706 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-209ENST00000472044 SMAP1Q8IYB5 467 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-209ENST00000472044 CPXCR1Q8N123 301 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 LRRC71Q8N4P6 559 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 VPS50Q96JG6 964 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 RTKNQ9BST9 563 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 FSD1LQ9BXM9 530 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms