RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 PEX26Q7Z412 305 aa20.33■□□□□ 0.85
CHMP2B-204ENST00000472024 DEFB106AQ8N104 65 aa20.33■□□□□ 0.85
CHMP2B-204ENST00000472024 ARFGAP1Q8N6T3 406 aa20.33■□□□□ 0.85
CHMP2B-204ENST00000472024 SLC7A14Q8TBB6 771 aa20.33■□□□□ 0.85
CHMP2B-204ENST00000472024 GOLPH3Q9H4A6 298 aa20.33■□□□□ 0.85
CHMP2B-204ENST00000472024 CERS4Q9HA82 394 aa20.33■□□□□ 0.85
CHMP2B-204ENST00000472024 DNAI1Q9UI46 699 aa20.33■□□□□ 0.85
CHMP2B-204ENST00000472024 AMFRQ9UKV5 643 aa20.33■□□□□ 0.85
CHMP2B-204ENST00000472024 CTAGE9A4FU28 777 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 LRCH4O75427 683 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 GRAP2O75791 330 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 ZMYND10O75800 440 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 HNRNPA1P09651 372 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 CA8P35219 290 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 CTNNA1P35221 906 aaKnown RBP20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 AMPD2Q01433 879 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 TAF10Q12962 218 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 MTMR3Q13615 1198 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 POLNQ7Z5Q5 900 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 GPR152Q8TDT2 470 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 GIPC2Q8TF65 315 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 GOLGA1Q92805 767 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 FBXO32Q969P5 355 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 FAM149B1Q96BN6 582 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 SLITRK1Q96PX8 696 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 LRRC3Q9BY71 257 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 NMUR1Q9HB89 426 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 GMIPQ9P107 970 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 UXTQ9UBK9 157 aaPredicted RBP20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 STAP1Q9ULZ2 295 aa20.32■□□□□ 0.84
CHMP2B-204ENST00000472024 MYO16Q9Y6X6 1858 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 DDX3YO15523 660 aaKnown RBP20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 PSTPIP1O43586 416 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 FTCDO95954 541 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 POU3F3P20264 500 aaPredicted RBP20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 CASQ1P31415 396 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 PGFP49763 221 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 TUBP50607 506 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 EPHA5P54756 1037 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 RNASE9P60153 205 aaKnown RBP20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 DNAJB7Q7Z6W7 309 aaPredicted RBP20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 ADAM33Q9BZ11 813 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 ZNF576Q9H609 170 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 TLR8Q9NR97 1041 aaKnown RBP20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 OSER1Q9NX31 292 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 ZDHHC7Q9NXF8 308 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 PCDHA3Q9Y5H8 950 aa20.31■□□□□ 0.84
CHMP2B-204ENST00000472024 A0A1W2PQH9 124 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 CCDC66A2RUB6 948 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 CES2O00748 559 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 ATP1A1P05023 1023 aaKnown RBP20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 EPCAMP16422 314 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 PEX5P50542 639 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 HDAC4P56524 1084 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 SLC25A11Q02978 314 aaKnown RBP20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 SYPL2Q5VXT5 272 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 KLHDC10Q6PID8 442 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 ELMSAN1Q6PJG2 1045 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 TMEM184AQ6ZMB5 413 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 ADGRD2Q7Z7M1 963 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 CPNE8Q86YQ8 564 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 TMC8Q8IU68 726 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 STKLD1Q8NE28 680 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 CMASQ8NFW8 434 aaPredicted RBP20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 KIF18AQ8NI77 898 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 CFAP57Q96MR6 1250 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 CDK5RAP1Q96SZ6 601 aaKnown RBP20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 SMOC2Q9H3U7 446 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 IL21Q9HBE4 155 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 MAN1C1Q9NR34 630 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 NAALADL1Q9UQQ1 740 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 HCFC2Q9Y5Z7 792 aa20.3■□□□□ 0.84
CHMP2B-204ENST00000472024 SPOPO43791 374 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 TADA3O75528 432 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 LRG1P02750 347 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 SPATA31D3P0C874 917 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 DESP17661 470 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 TAS2R40P59535 323 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 NNTQ13423 1086 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 RPS6KA1Q15418 735 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 DCAF6Q58WW2 860 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 BTBD8Q5XKL5 378 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 CC2D1AQ6P1N0 951 aaPredicted RBP20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 SPATA31D4Q6ZUB0 917 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 CYP4V2Q6ZWL3 525 aaPredicted RBP20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 RHOT1Q8IXI2 618 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 DQX1Q8TE96 717 aaKnown RBP20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 FAM172AQ8WUF8 416 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 PPP2R3CQ969Q6 453 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 TBCBQ99426 244 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 TLE6Q9H808 572 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 OLA1Q9NTK5 396 aaKnown RBP20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 SNX12Q9UMY4 172 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 COLQQ9Y215 455 aaPredicted RBP20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 TRIOBPQ9H2D6 2365 aa20.29■□□□□ 0.84
CHMP2B-204ENST00000472024 ZNF840PA6NDX5 716 aa20.28■□□□□ 0.84
CHMP2B-204ENST00000472024 TMEM110-MUSTN1A8MSY1 372 aa20.28■□□□□ 0.84
CHMP2B-204ENST00000472024 CAPN9O14815 690 aa20.28■□□□□ 0.84
CHMP2B-204ENST00000472024 RNF8O76064 485 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms