RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 RASSF8Q8NHQ8 419 aa20.18■□□□□ 0.82
SORT1-203ENST00000471996 WBP2Q969T9 261 aa20.18■□□□□ 0.82
SORT1-203ENST00000471996 XPO6Q96QU8 1125 aaKnown RBP20.18■□□□□ 0.82
SORT1-203ENST00000471996 MMS19Q96T76 1030 aa20.18■□□□□ 0.82
SORT1-203ENST00000471996 KIF2CQ99661 725 aa20.18■□□□□ 0.82
SORT1-203ENST00000471996 GPR174Q9BXC1 333 aa20.18■□□□□ 0.82
SORT1-203ENST00000471996 ELOVL4Q9GZR5 314 aa20.18■□□□□ 0.82
SORT1-203ENST00000471996 MRPL44Q9H9J2 332 aaKnown RBP20.18■□□□□ 0.82
SORT1-203ENST00000471996 CHORDC1Q9UHD1 332 aaPredicted RBP20.18■□□□□ 0.82
SORT1-203ENST00000471996 NME7Q9Y5B8 376 aa20.18■□□□□ 0.82
SORT1-203ENST00000471996 FAM149AA5PLN7 773 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 GOLGA8CPA6NN73 597 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 ATXN7O15265 892 aaPredicted RBP20.17■□□□□ 0.82
SORT1-203ENST00000471996 RTN3O95197 1032 aaPredicted RBP20.17■□□□□ 0.82
SORT1-203ENST00000471996 GNL1P36915 607 aaPredicted RBP20.17■□□□□ 0.82
SORT1-203ENST00000471996 TUBP50607 506 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 SMAD1Q15797 465 aaKnown RBP20.17■□□□□ 0.82
SORT1-203ENST00000471996 DCAF12L1Q5VU92 463 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 OR5B17Q8NGF7 314 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 PIP4K2CQ8TBX8 421 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 DCBLD2Q96PD2 775 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 MRPL45Q9BRJ2 306 aaKnown RBP20.17■□□□□ 0.82
SORT1-203ENST00000471996 CBWD1Q9BRT8 395 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 ZNF518BQ9C0D4 1074 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 CCSER2Q9H7U1 834 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 ITM2CQ9NQX7 267 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 USP36Q9P275 1121 aaKnown RBP20.17■□□□□ 0.82
SORT1-203ENST00000471996 SEL1LQ9UBV2 794 aa20.17■□□□□ 0.82
SORT1-203ENST00000471996 WASH3PC4AMC7 463 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 E9PAM4 449 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 NEDD8-MDP1E9PL57 170 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 TNNC2P02585 160 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 PLA2G2AP14555 144 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 TYRP14679 529 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 PTPN1P18031 435 aaKnown RBP20.16■□□□□ 0.82
SORT1-203ENST00000471996 SUZ12Q15022 739 aaKnown RBP20.16■□□□□ 0.82
SORT1-203ENST00000471996 DYMQ7RTS9 669 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 NOC3LQ8WTT2 800 aaKnown RBP20.16■□□□□ 0.82
SORT1-203ENST00000471996 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 WDR35Q9P2L0 1181 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 BTBD3Q9Y2F9 522 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 PTPRJQ12913 1337 aa20.16■□□□□ 0.82
SORT1-203ENST00000471996 METTL12A8MUP2 240 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 TACC1O75410 805 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 IRF1P10914 325 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 LONP1P36776 959 aaKnown RBP20.15■□□□□ 0.82
SORT1-203ENST00000471996 DUOXA2Q1HG44 320 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 HTR3DQ70Z44 454 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 OR6B3Q8NGW1 331 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 BBS2Q9BXC9 721 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 B3GNT5Q9BYG0 378 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 PCIF1Q9H4Z3 704 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 MARK1Q9P0L2 795 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 TBC1D7Q9P0N9 293 aa20.15■□□□□ 0.82
SORT1-203ENST00000471996 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.15■□□□□ 0.82
SORT1-203ENST00000471996 KCNJ18B7U540 433 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 CLDN5O00501 218 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 TNFSF14O43557 240 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 GREM1O60565 184 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 GCNT3O95395 438 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 FAM163BP0C2L3 166 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 OXTRP30559 389 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 PTPRNQ16849 979 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 FUT11Q495W5 492 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 SYCP3Q8IZU3 236 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 GPD1LQ8N335 351 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 LSM14AQ8ND56 463 aaKnown RBP20.14■□□□□ 0.81
SORT1-203ENST00000471996 C1orf216Q8TAB5 229 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 SCAMP5Q8TAC9 235 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 MKRN2Q9H000 416 aaKnown RBP20.14■□□□□ 0.81
SORT1-203ENST00000471996 DPEP3Q9H4B8 488 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 PRORYQ9H606 182 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 IL37Q9NZH6 218 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 EIF2B4Q9UI10 523 aaKnown RBP20.14■□□□□ 0.81
SORT1-203ENST00000471996 PCDHB13Q9Y5F0 798 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 STON1Q9Y6Q2 735 aa20.14■□□□□ 0.81
SORT1-203ENST00000471996 KALRNO60229 2985 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 CISD3P0C7P0 127 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 ZDHHC11BP0C7U3 371 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 GAP43P17677 238 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 ITPKBP27987 946 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 DGKGP49619 791 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 GRIN1Q05586 938 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 STARD3Q14849 445 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 TPGS1Q6ZTW0 290 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 ZNF605Q86T29 641 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 KCNK16Q96T55 309 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 TRIM9Q9C026 710 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 NACA2Q9H009 215 aa20.13■□□□□ 0.81
SORT1-203ENST00000471996 A0A1B0GVT2 93 aa20.12■□□□□ 0.81
SORT1-203ENST00000471996 HLA-EP13747 358 aa20.12■□□□□ 0.81
SORT1-203ENST00000471996 TPMTP51580 245 aa20.12■□□□□ 0.81
SORT1-203ENST00000471996 CASP5P51878 434 aa20.12■□□□□ 0.81
SORT1-203ENST00000471996 ZNF132P52740 706 aa20.12■□□□□ 0.81
SORT1-203ENST00000471996 SLC5A3P53794 718 aa20.12■□□□□ 0.81
SORT1-203ENST00000471996 SURF1Q15526 300 aa20.12■□□□□ 0.81
SORT1-203ENST00000471996 B3GALNT2Q8NCR0 500 aa20.12■□□□□ 0.81
SORT1-203ENST00000471996 GMIPQ9P107 970 aa20.12■□□□□ 0.81
SORT1-203ENST00000471996 KIF3AQ9Y496 699 aa20.12■□□□□ 0.81
SORT1-203ENST00000471996 RAI2Q9Y5P3 530 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms