RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 PAQR9Q6ZVX9 377 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 BRAPQ7Z569 592 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 FAM35AQ86V20 835 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 HPS3Q969F9 1004 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 P2RY11Q96G91 374 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 GZF1Q9H116 711 aaPredicted RBP20.97■□□□□ 0.95
CCDC78-208ENST00000471861 IL21RQ9HBE5 538 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 PANK4Q9NVE7 773 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 TOR4AQ9NXH8 423 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 CCDC39Q9UFE4 941 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 SUSD2Q9UGT4 822 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 FAM92AA1XBS5 289 aa20.96■□□□□ 0.95
CCDC78-208ENST00000471861 WASH3PC4AMC7 463 aa20.96■□□□□ 0.95
CCDC78-208ENST00000471861 NEDD8-MDP1E9PL57 170 aa20.96■□□□□ 0.95
CCDC78-208ENST00000471861 SURF1Q15526 300 aa20.96■□□□□ 0.95
CCDC78-208ENST00000471861 WDR72Q3MJ13 1102 aa20.96■□□□□ 0.95
CCDC78-208ENST00000471861 BAHD1Q8TBE0 780 aaPredicted RBP20.96■□□□□ 0.95
CCDC78-208ENST00000471861 SETXQ7Z333 2677 aaKnown RBP20.96■□□□□ 0.95
CCDC78-208ENST00000471861 A8MXQ7 604 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 FAM163BP0C2L3 166 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 DLATP10515 647 aaKnown RBP20.95■□□□□ 0.94
CCDC78-208ENST00000471861 TYRP14679 529 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 TNNC1P63316 161 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 BNC1Q01954 994 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 KIAA1324Q6UXG2 1013 aaKnown RBP20.95■□□□□ 0.94
CCDC78-208ENST00000471861 NUDT18Q6ZVK8 323 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 ZMIZ2Q8NF64 920 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 DNASE2BQ8WZ79 361 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 FOXJ1Q92949 421 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 CGRRF1Q99675 332 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 XYLT2Q9H1B5 865 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 MARK1Q9P0L2 795 aa20.95■□□□□ 0.94
CCDC78-208ENST00000471861 APOBEC2Q9Y235 224 aaKnown RBP20.95■□□□□ 0.94
CCDC78-208ENST00000471861 BPTFQ12830 3046 aa20.94■□□□□ 0.94
CCDC78-208ENST00000471861 NDUFS2O75306 463 aa20.94■□□□□ 0.94
CCDC78-208ENST00000471861 DKK1O94907 266 aa20.94■□□□□ 0.94
CCDC78-208ENST00000471861 SYCP2LQ5T4T6 812 aa20.94■□□□□ 0.94
CCDC78-208ENST00000471861 LARP1BQ659C4 914 aaKnown RBP20.94■□□□□ 0.94
CCDC78-208ENST00000471861 HTR3DQ70Z44 454 aa20.94■□□□□ 0.94
CCDC78-208ENST00000471861 MARCH9Q86YJ5 346 aa20.94■□□□□ 0.94
CCDC78-208ENST00000471861 ZCCHC9Q8N567 271 aaKnown RBP20.94■□□□□ 0.94
CCDC78-208ENST00000471861 ZNF516Q92618 1163 aa20.94■□□□□ 0.94
CCDC78-208ENST00000471861 BBS2Q9BXC9 721 aa20.94■□□□□ 0.94
CCDC78-208ENST00000471861 ZDHHC5Q9C0B5 715 aa20.94■□□□□ 0.94
CCDC78-208ENST00000471861 SMYD3Q9H7B4 428 aa20.94■□□□□ 0.94
CCDC78-208ENST00000471861 SRPRBQ9Y5M8 271 aaKnown RBP20.94■□□□□ 0.94
CCDC78-208ENST00000471861 TLR5O60602 858 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 STAU1O95793 577 aaKnown RBP20.93■□□□□ 0.94
CCDC78-208ENST00000471861 TBX18O95935 607 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 CISD3P0C7P0 127 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 GNSP15586 552 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 CD6P30203 668 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 MYL6P60660 151 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 RABEP1Q15276 862 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 SNRNP35Q16560 246 aaKnown RBP20.93■□□□□ 0.94
CCDC78-208ENST00000471861 WDR45BQ5MNZ6 344 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 SDE2Q6IQ49 451 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 TPGS1Q6ZTW0 290 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 RDH13Q8NBN7 331 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 SCFD1Q8WVM8 642 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 TOE1Q96GM8 510 aaKnown RBP20.93■□□□□ 0.94
CCDC78-208ENST00000471861 LRIG1Q96JA1 1093 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 KLF16Q9BXK1 252 aaPredicted RBP20.93■□□□□ 0.94
CCDC78-208ENST00000471861 DMAP1Q9NPF5 467 aaPredicted RBP20.93■□□□□ 0.94
CCDC78-208ENST00000471861 SCUBE2Q9NQ36 999 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 WSB2Q9NYS7 404 aaPredicted RBP20.93■□□□□ 0.94
CCDC78-208ENST00000471861 USP36Q9P275 1121 aaKnown RBP20.93■□□□□ 0.94
CCDC78-208ENST00000471861 NXF1Q9UBU9 619 aaKnown RBP20.93■□□□□ 0.94
CCDC78-208ENST00000471861 SMC3Q9UQE7 1217 aa20.93■□□□□ 0.94
CCDC78-208ENST00000471861 FNDC3AQ9Y2H6 1198 aaKnown RBP20.93■□□□□ 0.94
CCDC78-208ENST00000471861 A0A1B0GTW7 788 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 KCNJ18B7U540 433 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 ZBTB24O43167 697 aaPredicted RBP20.92■□□□□ 0.94
CCDC78-208ENST00000471861 TGFB1I1O43294 461 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 ZIC2O95409 532 aaPredicted RBP20.92■□□□□ 0.94
CCDC78-208ENST00000471861 TNNI1P19237 187 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 CDH8P55286 799 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 PSMD6Q15008 389 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 FUT11Q495W5 492 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 TMPRSS7Q7RTY8 843 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 FUKQ8N0W3 1084 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 SPRYD3Q8NCJ5 442 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 ELMO3Q96BJ8 720 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 CRELD1Q96HD1 420 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 XPO6Q96QU8 1125 aaKnown RBP20.92■□□□□ 0.94
CCDC78-208ENST00000471861 PANK2Q9BZ23 570 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 MKRN2Q9H000 416 aaKnown RBP20.92■□□□□ 0.94
CCDC78-208ENST00000471861 KRT82Q9NSB4 513 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 OSER1Q9NX31 292 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 KIAA1522Q9P206 1035 aaPredicted RBP20.92■□□□□ 0.94
CCDC78-208ENST00000471861 DKK4Q9UBT3 224 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 NFE2L3Q9Y4A8 694 aa20.92■□□□□ 0.94
CCDC78-208ENST00000471861 MEI4A8MW99 385 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 GFRA2O00451 464 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 BEST1O76090 585 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 ATXN1LP0C7T5 689 aaKnown RBP20.91■□□□□ 0.94
CCDC78-208ENST00000471861 NCAM1P13591 858 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 STAT6P42226 847 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 DGKGP49619 791 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 CYP24A1Q07973 514 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms