RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 METTL5Q9NRN9 209 aaKnown RBP10.37□□□□□ -0.75
SF3A1-207ENST00000471342 SEPT11Q9NVA2 429 aaKnown RBP10.37□□□□□ -0.75
SF3A1-207ENST00000471342 ZDHHC7Q9NXF8 308 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 NUDT5Q9UKK9 219 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 COL6A3P12111 3177 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 C5orf42Q9H799 3197 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 C2orf78A6NCI8 922 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 MDM4O15151 490 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 DDX3YO15523 660 aaKnown RBP10.36□□□□□ -0.75
SF3A1-207ENST00000471342 CCP110O43303 1012 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 DAB1O75553 588 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 PROSCO94903 275 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 FBXO21O94952 628 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 LTFP02788 710 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 CALB1P05937 261 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 PTMAP06454 111 aaKnown RBP10.36□□□□□ -0.75
SF3A1-207ENST00000471342 HNRNPA1P09651 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
SF3A1-207ENST00000471342 YWHAQP27348 245 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 PTPN9P43378 593 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 YWHAGP61981 247 aaKnown RBP eCLIP10.36□□□□□ -0.75
SF3A1-207ENST00000471342 KRT83P78385 493 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 SLC25A11Q02978 314 aaKnown RBP10.36□□□□□ -0.75
SF3A1-207ENST00000471342 TSR1Q2NL82 804 aaKnown RBP10.36□□□□□ -0.75
SF3A1-207ENST00000471342 C15orf59Q2T9L4 293 aaPredicted RBP10.36□□□□□ -0.75
SF3A1-207ENST00000471342 DCAF12L1Q5VU92 463 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 OR6B2Q6IFH4 312 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 GPR149Q86SP6 731 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 MON1AQ86VX9 555 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 ZDHHC17Q8IUH5 632 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 ZNF683Q8IZ20 524 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 ITFG1Q8TB96 612 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 DQX1Q8TE96 717 aaKnown RBP10.36□□□□□ -0.75
SF3A1-207ENST00000471342 CFAP57Q96MR6 1250 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 TBCBQ99426 244 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 HERPUD2Q9BSE4 406 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 SLC46A2Q9BY10 475 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 DEF6Q9H4E7 631 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 CCSER2Q9H7U1 834 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 ST7Q9NRC1 585 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 TMPRSS4Q9NRS4 437 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 CLIC5Q9NZA1 410 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 WDR35Q9P2L0 1181 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 UVRAGQ9P2Y5 699 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 MYO1AQ9UBC5 1043 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 NEU3Q9UQ49 428 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 HYOU1Q9Y4L1 999 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 ASB3Q9Y575 518 aa10.36□□□□□ -0.75
SF3A1-207ENST00000471342 CCDC195A0A1B0GUA6 201 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 C3orf70A6NLC5 250 aaPredicted RBP10.35□□□□□ -0.75
SF3A1-207ENST00000471342 KCNU1A8MYU2 1149 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 GOLGA8SH3BPF8 625 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 COCHO43405 550 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 BUB1O43683 1085 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 LRCH4O75427 683 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 KLKB1P03952 638 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 RHOP08100 348 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 CCDC175P0C221 793 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 CSH1P0DML2 217 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 CSH2P0DML3 217 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 KRT3P12035 628 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 FCARP24071 287 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 IL4RP24394 825 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 MATKP42679 507 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 MARCKSL1P49006 195 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 ZNF143P52747 638 aaPredicted RBP10.35□□□□□ -0.75
SF3A1-207ENST00000471342 YWHAZP63104 245 aaKnown RBP10.35□□□□□ -0.75
SF3A1-207ENST00000471342 PTPROQ16827 1216 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 ATP13A4Q4VNC1 1196 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 CCDC149Q6ZUS6 474 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 TAC4Q86UU9 113 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 NT5DC3Q86UY8 548 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 ZDHHC14Q8IZN3 488 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 ZNF564Q8TBZ8 553 aaPredicted RBP10.35□□□□□ -0.75
SF3A1-207ENST00000471342 FAM71BQ8TC56 605 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 OVCA2Q8WZ82 227 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 EDEM1Q92611 657 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 ALG3Q92685 438 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 KRT35Q92764 455 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 FCRL2Q96LA5 508 aaPredicted RBP10.35□□□□□ -0.75
SF3A1-207ENST00000471342 MCEEQ96PE7 176 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 CYP2S1Q96SQ9 504 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 KLF16Q9BXK1 252 aaPredicted RBP10.35□□□□□ -0.75
SF3A1-207ENST00000471342 TLR10Q9BXR5 811 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 LRRC4Q9HBW1 653 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 PARVAQ9NVD7 372 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 XPO7Q9UIA9 1087 aaKnown RBP10.35□□□□□ -0.75
SF3A1-207ENST00000471342 ALG6Q9Y672 507 aa10.35□□□□□ -0.75
SF3A1-207ENST00000471342 MTCL1Q9Y4B5 1905 aaKnown RBP10.35□□□□□ -0.75
SF3A1-207ENST00000471342 PRRG1O14668 218 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 HSF2BPO75031 334 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 PALMO75781 387 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 RTN3O95197 1032 aaPredicted RBP10.34□□□□□ -0.75
SF3A1-207ENST00000471342 RARGP13631 454 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 NOS2P35228 1153 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 CXCR3P49682 368 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 CYP4F8P98187 520 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 AMPD2Q01433 879 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 PLD1Q13393 1074 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 SPA17Q15506 151 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms