RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 KRT10P13645 584 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 CPB1P15086 417 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 TFE3P19532 575 aaPredicted RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 CYP2F1P24903 491 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 RDXP35241 583 aaKnown RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 GRIK1P39086 918 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 SLC5A3P53794 718 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 AIF1P55008 147 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 MRPS25P82663 173 aaKnown RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 PPIGQ13427 754 aaKnown RBP eCLIP9.79□□□□□ -0.841e-7■■■■■ 27.5
VPS52-216ENST00000471309 DPYSL3Q14195 570 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 DPYSL2Q16555 572 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 USP41Q3LFD5 358 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 RAB6CQ53S08 254 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 DCAF6Q58WW2 860 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 BEND6Q5SZJ8 279 aaPredicted RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 SLC8B1Q6J4K2 584 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 EMBQ6PCB8 327 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 DRICH1Q6PGQ1 229 aaPredicted RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 KCNT2Q6UVM3 1135 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 HFE2Q6ZVN8 426 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 SYDE1Q6ZW31 735 aaPredicted RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 MAP7D3Q8IWC1 876 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 SLC39A11Q8N1S5 342 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 KCTD6Q8NC69 237 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 SPPL2BQ8TCT7 592 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 AENQ8WTP8 325 aaKnown RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 GRK7Q8WTQ7 553 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 C1orf54Q8WWF1 131 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 PIK3R5Q8WYR1 880 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 PGAP3Q96FM1 320 aaPredicted RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 B3GALT6Q96L58 329 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 ZNF558Q96NG5 402 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 ZNF670Q9BS34 389 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 SNRNP25Q9BV90 132 aaKnown RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 VN1R3Q9BXE9 311 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 RAB6CQ9H0N0 254 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 FAM114A2Q9NRY5 505 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 CHST7Q9NS84 486 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 MTRRQ9UBK8 725 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 FEZ2Q9UHY8 353 aaPredicted RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 R3HDM2Q9Y2K5 976 aaKnown RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 UTP11Q9Y3A2 253 aaKnown RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 BACE2Q9Y5Z0 518 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 BRCA2P51587 3418 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 ESYT3A0FGR9 886 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 MTMR11A4FU01 709 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 ATP8B1O43520 1251 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 LIASO43766 372 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 SEC31AO94979 1220 aaKnown RBP9.78□□□□□ -0.84
VPS52-216ENST00000471309 GAS8O95995 478 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 SOD2P04179 222 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 CD48P09326 243 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 ACRP10323 421 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 GBP1P32455 592 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 CDR1P51861 262 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 RABGGTBP53611 331 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 EPHB4P54760 987 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 DRG2P55039 364 aaKnown RBP9.78□□□□□ -0.84
VPS52-216ENST00000471309 CDH6P55285 790 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 FPGSQ05932 587 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 ADCY2Q08462 1091 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 NNTQ13423 1086 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 TFDP2Q14188 446 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 BTG3Q14201 252 aaPredicted RBP9.78□□□□□ -0.84
VPS52-216ENST00000471309 KRT81Q14533 505 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 LLGL1Q15334 1064 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 ERMARDQ5T6L9 678 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 SYPL2Q5VXT5 272 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 KAZNQ674X7 775 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 SCYL2Q6P3W7 929 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 CCDC105Q8IYK2 499 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 TTC13Q8NBP0 860 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 CASKIN2Q8WXE0 1202 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 ATG4AQ8WYN0 398 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 NDRG1Q92597 394 aaKnown RBP9.78□□□□□ -0.84
VPS52-216ENST00000471309 NKD2Q969F2 451 aaPredicted RBP9.78□□□□□ -0.84
VPS52-216ENST00000471309 NTAN1Q96AB6 310 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 FAF2Q96CS3 445 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 SLC9A7Q96T83 725 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 ERP44Q9BS26 406 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 TRIM51Q9BSJ1 452 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 HERC2P3Q9BVR0 1158 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 CALN1Q9BXU9 219 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 PCDH18Q9HCL0 1135 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 CALCOCO1Q9P1Z2 691 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 RCOR3Q9P2K3 495 aaPredicted RBP9.78□□□□□ -0.84
VPS52-216ENST00000471309 PRKAG2Q9UGJ0 569 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 AP4E1Q9UPM8 1137 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 NAALADL1Q9UQQ1 740 aa9.78□□□□□ -0.84
VPS52-216ENST00000471309 MRPL42Q9Y6G3 142 aaKnown RBP9.78□□□□□ -0.84
VPS52-216ENST00000471309 APOC4-APOC2K7ER74 178 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 M0QYT0 321 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 CST8O60676 142 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 F9P00740 461 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 APOC2P02655 101 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 NCAM1P13591 858 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 EN2P19622 333 aaPredicted RBP9.77□□□□□ -0.85
VPS52-216ENST00000471309 ECHS1P30084 290 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms