RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TMEM31Q5JXX7 168 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 C10orf120Q5SQS8 335 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 HFE2Q6ZVN8 426 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 CPXM1Q96SM3 734 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 FAM83CQ9BQN1 747 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 KLF16Q9BXK1 252 aaPredicted RBP20.72■□□□□ 0.91
HDAC7-220ENST00000471235 TTYH3Q9C0H2 523 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 MIS12Q9H081 205 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 HEBP1Q9NRV9 189 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 CFAP97Q9P2B7 532 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 CEP83Q9Y592 693 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 WNT6Q9Y6F9 365 aa20.72■□□□□ 0.91
HDAC7-220ENST00000471235 MMEP08473 750 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 CDH5P33151 784 aaPredicted RBP20.71■□□□□ 0.91
HDAC7-220ENST00000471235 TNK2Q07912 1038 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 SLC44A4Q53GD3 710 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 BSPRYQ5W0U4 402 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 BTBD8Q5XKL5 378 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 TRIM68Q6AZZ1 485 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 CC2D1AQ6P1N0 951 aaPredicted RBP20.71■□□□□ 0.91
HDAC7-220ENST00000471235 BMP8AQ7Z5Y6 402 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 TADA2BQ86TJ2 420 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 TMEM110Q86TL2 294 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 CDK5RAP1Q96SZ6 601 aaKnown RBP20.71■□□□□ 0.91
HDAC7-220ENST00000471235 PDCL3Q9H2J4 239 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 HPS4Q9NQG7 708 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 GKN1Q9NS71 199 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 RASAL2Q9UJF2 1139 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 DNMT3LQ9UJW3 386 aa20.71■□□□□ 0.91
HDAC7-220ENST00000471235 PRR33A8MZF0 331 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 SCAMP3O14828 347 aaKnown RBP20.7■□□□□ 0.9
HDAC7-220ENST00000471235 PAPSS1O43252 624 aaPredicted RBP20.7■□□□□ 0.9
HDAC7-220ENST00000471235 IRF1P10914 325 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 ARSAP15289 507 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 CHRNB2P17787 502 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 IFNAR2P48551 515 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 FMO1Q01740 532 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 CDR2Q01850 454 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 PTPN20Q4JDL3 420 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 CWF19L1Q69YN2 538 aaKnown RBP20.7■□□□□ 0.9
HDAC7-220ENST00000471235 RSRC2Q7L4I2 434 aaKnown RBP20.7■□□□□ 0.9
HDAC7-220ENST00000471235 ZNF677Q86XU0 584 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 CSGALNACT1Q8TDX6 532 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 OSCP1Q8WVF1 389 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 EDEM1Q92611 657 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 WBP2Q969T9 261 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 PBXIP1Q96AQ6 731 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 PPP1R13BQ96KQ4 1090 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 NOX5Q96PH1 765 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 XPO4Q9C0E2 1151 aaKnown RBP20.7■□□□□ 0.9
HDAC7-220ENST00000471235 DUS2Q9NX74 493 aaKnown RBP20.7■□□□□ 0.9
HDAC7-220ENST00000471235 GTSE1Q9NYZ3 720 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 MYO6Q9UM54 1294 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 F5P12259 2224 aa20.7■□□□□ 0.9
HDAC7-220ENST00000471235 LSM8O95777 96 aaKnown RBP20.69■□□□□ 0.9
HDAC7-220ENST00000471235 LTFP02788 710 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 ERBB2P04626 1255 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 NOMO3P69849 1222 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 ARID5AQ03989 594 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 PRKCQQ04759 706 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 EFEMP1Q12805 493 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 PDGFRLQ15198 375 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 FIGNQ5HY92 759 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 TPRG1Q6ZUI0 275 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 MIB1Q86YT6 1006 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 SCUBE3Q8IX30 993 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 KIAA1958Q8N8K9 716 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 TMEM35BQ8NCS4 154 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 PIWIL1Q96J94 861 aaKnown RBP20.69■□□□□ 0.9
HDAC7-220ENST00000471235 LRFN3Q9BTN0 628 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 MFSD1Q9H3U5 465 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 EBF3Q9H4W6 596 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 TBC1D17Q9HA65 648 aa20.69■□□□□ 0.9
HDAC7-220ENST00000471235 ZDBF2Q9HCK1 2354 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 E2F8A0AVK6 867 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 FAM170AA1A519 330 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 SHISA7A6NL88 538 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 LRRC53A6NM62 1247 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 SART1O43290 800 aaKnown RBP20.68■□□□□ 0.9
HDAC7-220ENST00000471235 FERP16591 822 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 SOX9P48436 509 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 EML3Q32P44 896 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 ITPRIPL2Q3MIP1 535 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 MSANTD2Q6P1R3 559 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 TTC8Q8TAM2 541 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 IPO4Q8TEX9 1081 aaKnown RBP20.68■□□□□ 0.9
HDAC7-220ENST00000471235 DDX23Q9BUQ8 820 aaKnown RBP20.68■□□□□ 0.9
HDAC7-220ENST00000471235 EDEM3Q9BZQ6 932 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 ABCC13Q9NSE7 274 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 OLA1Q9NTK5 396 aaKnown RBP20.68■□□□□ 0.9
HDAC7-220ENST00000471235 MARCH2Q9P0N8 246 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 SH3BP1Q9Y3L3 701 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 PIAS3Q9Y6X2 628 aa20.68■□□□□ 0.9
HDAC7-220ENST00000471235 STARD6P59095 220 aa20.67■□□□□ 0.9
HDAC7-220ENST00000471235 GOLGA8FQ08AF8 430 aa20.67■□□□□ 0.9
HDAC7-220ENST00000471235 GOLGA8DPQ0D2H9 430 aa20.67■□□□□ 0.9
HDAC7-220ENST00000471235 RUNX3Q13761 415 aa20.67■□□□□ 0.9
HDAC7-220ENST00000471235 NAA35Q5VZE5 725 aa20.67■□□□□ 0.9
HDAC7-220ENST00000471235 E4F1Q66K89 784 aaPredicted RBP20.67■□□□□ 0.9
HDAC7-220ENST00000471235 FAM183BPQ6ZVS7 135 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms