RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 RALAP11233 206 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 KRT5P13647 590 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 NBL1P41271 181 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 KCNMA1Q12791 1236 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 GAS6Q14393 721 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 MEA1Q16626 185 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 GAB4Q2WGN9 574 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 ZNF528Q3MIS6 628 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 C10orf120Q5SQS8 335 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 FSTL4Q6MZW2 842 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 PMF1Q6P1K2 205 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 RHBDF2Q6PJF5 856 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 C11orf57Q6ZUT1 292 aaPredicted RBP14.86□□□□□ -0.03
TOP3B-215ENST00000470338 HTR3DQ70Z44 454 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 BHLHA9Q7RTU4 235 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 TADA2BQ86TJ2 420 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 SHC3Q92529 594 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 SECISBP2LQ93073 1101 aaKnown RBP14.86□□□□□ -0.03
TOP3B-215ENST00000470338 CDK5RAP1Q96SZ6 601 aaKnown RBP14.86□□□□□ -0.03
TOP3B-215ENST00000470338 P2RY13Q9BPV8 354 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 LRRC4Q9HBW1 653 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 FBRSL1Q9HCM7 1045 aaKnown RBP14.86□□□□□ -0.03
TOP3B-215ENST00000470338 RBM12Q9NTZ6 932 aaKnown RBP14.86□□□□□ -0.03
TOP3B-215ENST00000470338 FAM86C1Q9NVL1 165 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 DNMT3LQ9UJW3 386 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 NUDT5Q9UKK9 219 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 SH3BP1Q9Y3L3 701 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 DMDP11532 3685 aa14.86□□□□□ -0.03
TOP3B-215ENST00000470338 PROB1E7EW31 1015 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 M0QYV0 167 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 CYP17A1P05093 508 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 DRD1P21728 446 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 GPD2P43304 727 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 RPL34P49207 117 aaKnown RBP14.85□□□□□ -0.03
TOP3B-215ENST00000470338 YWHAGP61981 247 aaKnown RBP eCLIP14.85□□□□□ -0.03
TOP3B-215ENST00000470338 ADIGQ0VDE8 80 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 GRSF1Q12849 480 aaKnown RBP eCLIP14.85□□□□□ -0.03
TOP3B-215ENST00000470338 DHCR24Q15392 516 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 ARHGAP44Q17R89 818 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 SPEM1Q8N4L4 309 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 ZNF606Q8WXB4 792 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 NDRG1Q92597 394 aaKnown RBP14.85□□□□□ -0.03
TOP3B-215ENST00000470338 EXOC4Q96A65 974 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 HSFY1Q96LI6 401 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 CNGB3Q9NQW8 809 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 PRMT8Q9NR22 394 aaPredicted RBP14.85□□□□□ -0.03
TOP3B-215ENST00000470338 FANCLQ9NW38 375 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 DNAJC12Q9UKB3 198 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 USP34Q70CQ2 3546 aa14.85□□□□□ -0.03
TOP3B-215ENST00000470338 SCAMP3O14828 347 aaKnown RBP14.84□□□□□ -0.03
TOP3B-215ENST00000470338 MDM4O15151 490 aa14.84□□□□□ -0.03
TOP3B-215ENST00000470338 LETM1O95202 739 aaPredicted RBP14.84□□□□□ -0.03
TOP3B-215ENST00000470338 OPRD1P41143 372 aa14.84□□□□□ -0.03
TOP3B-215ENST00000470338 DAOAP59103 153 aa14.84□□□□□ -0.03
TOP3B-215ENST00000470338 GOLGA8FQ08AF8 430 aa14.84□□□□□ -0.03
TOP3B-215ENST00000470338 GOLGA8DPQ0D2H9 430 aa14.84□□□□□ -0.03
TOP3B-215ENST00000470338 NAIF1Q69YI7 327 aaPredicted RBP14.84□□□□□ -0.03
TOP3B-215ENST00000470338 BBS7Q8IWZ6 715 aa14.84□□□□□ -0.03
TOP3B-215ENST00000470338 SIX6OS1Q8N1H7 587 aa14.84□□□□□ -0.03
TOP3B-215ENST00000470338 NELL1Q92832 810 aa14.84□□□□□ -0.03
TOP3B-215ENST00000470338 CD101Q93033 1021 aa14.84□□□□□ -0.03
TOP3B-215ENST00000470338 ACP6Q9NPH0 428 aa14.84□□□□□ -0.03
TOP3B-215ENST00000470338 AJAP1Q9UKB5 411 aaPredicted RBP14.84□□□□□ -0.03
TOP3B-215ENST00000470338 MYO18AQ92614 2054 aaKnown RBP14.84□□□□□ -0.03
TOP3B-215ENST00000470338 YJEFN3A6XGL0 299 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 E7ENQ6 273 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 FOXN3O00409 490 aaPredicted RBP14.83□□□□□ -0.04
TOP3B-215ENST00000470338 MED7O43513 233 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 STC2O76061 302 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 ADH1CP00326 375 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 EGFP01133 1207 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 IRF1P10914 325 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 TDGF1P13385 188 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 LCP1P13796 627 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 GNA15P30679 374 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 HOXD11P31277 338 aaPredicted RBP14.83□□□□□ -0.04
TOP3B-215ENST00000470338 RGS7P49802 495 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 CCR3P51677 355 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 COG7P83436 770 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 MYL5Q02045 173 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 CSTF1Q05048 431 aaKnown RBP14.83□□□□□ -0.04
TOP3B-215ENST00000470338 TYRO3Q06418 890 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 KRT31Q15323 416 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 LY6G5CQ5SRR4 150 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 KLHDC7AQ5VTJ3 777 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 BSPRYQ5W0U4 402 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 BTBD8Q5XKL5 378 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 Q6ZNB5 142 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 Q6ZS52 159 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 STK32AQ8WU08 396 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 IRGQQ8WZA9 623 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 EZH1Q92800 747 aaPredicted RBP14.83□□□□□ -0.04
TOP3B-215ENST00000470338 TAB2Q9NYJ8 693 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 WDR87Q6ZQQ6 2873 aa14.83□□□□□ -0.04
TOP3B-215ENST00000470338 LRRC10BA6NIK2 292 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 PES1O00541 588 aaKnown RBP14.82□□□□□ -0.04
TOP3B-215ENST00000470338 THAP12O43422 761 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 FBXO21O94952 628 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 PAPSS2O95340 614 aaPredicted RBP14.82□□□□□ -0.04
TOP3B-215ENST00000470338 CLCN1P35523 988 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms