RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 HELZP42694 1942 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 A0A1W2PQF6 199 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZNF840PA6NDX5 716 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 K7ENM7 598 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 GFRA2O00451 464 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 TRIM66O15016 1216 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 TULP3O75386 442 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 MBL2P11226 248 aaPredicted RBP9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 NCAM1P13591 858 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 JUPP14923 745 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 ACAT1P24752 427 aaKnown RBP9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 WASP42768 502 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 ACOT2P49753 483 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 MESP2Q0VG99 397 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 POSTNQ15063 836 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 E2F5Q15329 346 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 ANO4Q32M45 955 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 INAVAQ3KP66 663 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 GRAMD4Q6IC98 578 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 KIAA1324Q6UXG2 1013 aaKnown RBP9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 CCDC73Q6ZRK6 1079 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 RBM43Q6ZSC3 357 aaKnown RBP9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 METTL3Q86U44 580 aaKnown RBP9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 DRC7Q8IY82 874 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 MYCT1Q8N699 235 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 NAT16Q8N8M0 369 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 TERB1Q8NA31 727 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 UBE2Q2Q8WVN8 375 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 C8orf76Q96K31 380 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 FCRL3Q96P31 734 aaPredicted RBP9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 SLITRK1Q96PX8 696 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 XPO6Q96QU8 1125 aaKnown RBP9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 RNF38Q9H0F5 515 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 CLMPQ9H6B4 373 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 SMPD4Q9NXE4 827 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 TOR4AQ9NXH8 423 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 AGO2Q9UKV8 859 aaKnown RBP9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 ODF2LQ9ULJ1 636 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 L1RE1Q9UN81 338 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 AGAP1Q9UPQ3 857 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 SH3BP1Q9Y3L3 701 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 AK5Q9Y6K8 562 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 MYOFQ9NZM1 2061 aa9.47□□□□□ -0.89
SYNGAP1-205ENST00000470232 KNTC1P50748 2209 aa9.46□□□□□ -0.89
SYNGAP1-205ENST00000470232 FAM149AA5PLN7 773 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 PLK4O00444 970 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 ARHGAP6O43182 974 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 HOXC11O43248 304 aaPredicted RBP9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 FAM13AO94988 1023 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 PLA2G4BP0C869 781 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 ITPKBP27987 946 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 PRPHP41219 470 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 GRK6P43250 576 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 ZNF75DP51815 510 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 ZNF132P52740 706 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 GUCY1B3Q02153 619 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 KCNC4Q03721 635 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 STARD3Q14849 445 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 TEAD4Q15561 434 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 TAF1BQ53T94 588 aaPredicted RBP9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 CCDC157Q569K6 752 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 ATL3Q6DD88 541 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 FAM171BQ6P995 826 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 DPH6Q7L8W6 267 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 LUZP1Q86V48 1076 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 ETFBKMTQ8IXQ9 262 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 C17orf53Q8N3J3 647 aaPredicted RBP9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 PHTF2Q8N3S3 785 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 ZCCHC9Q8N567 271 aaKnown RBP9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 TOP6BLQ8N6T0 577 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 LRRC52Q8N7C0 313 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 MYRIPQ8NFW9 859 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 TOE1Q96GM8 510 aaKnown RBP9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 GPR174Q9BXC1 333 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 PDCL3Q9H2J4 239 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 IL21RQ9HBE5 538 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 PARVGQ9HBI0 331 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 SPHK2Q9NRA0 654 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 SPTLC3Q9NUV7 552 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 GDAP2Q9NXN4 497 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 WSB2Q9NYS7 404 aaPredicted RBP9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 CDH9Q9ULB4 789 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 SNX9Q9Y5X1 595 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 ZNF462Q96JM2 2506 aa9.46□□□□□ -0.9
SYNGAP1-205ENST00000470232 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 OLFM2O95897 454 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 OAS1P00973 400 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 ACADMP11310 421 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 PRKCSHP14314 528 aaPredicted RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 BDNFP23560 247 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 POLR2BP30876 1174 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 AFF3P51826 1226 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 SLC12A3P55017 1021 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 NOP14P78316 857 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 RBP5P82980 135 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 TFAMQ00059 246 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 CYP27A1Q02318 531 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 SEMG2Q02383 582 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms