RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 NOP14P78316 857 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 POU5F1Q01860 360 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 PREPLQ4J6C6 727 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 L1TD1Q5T7N2 865 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 ARL6IP4Q66PJ3 421 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 SNX19Q92543 992 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 HVCN1Q96D96 273 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 TOE1Q96GM8 510 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 ZNF419Q96HQ0 510 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 ZFRQ96KR1 1074 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 MRGPRX1Q96LB2 322 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 C8orf48Q96LL4 319 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 AK8Q96MA6 479 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 MED10Q9BTT4 135 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 BBS2Q9BXC9 721 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 FGFBP2Q9BYJ0 223 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 ST6GALNAC4Q9H4F1 302 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 TM7SF3Q9NS93 570 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 INTS13Q9NVM9 706 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 BTBD3Q9Y2F9 522 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 FNDC3AQ9Y2H6 1198 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 NME7Q9Y5B8 376 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 A0A1B0GTW7 788 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 PRRT4C9JH25 899 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 HOXC11O43248 304 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-204ENST00000470191 CBFA2T3O75081 653 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 CILPO75339 1184 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 TYRP14679 529 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 CD6P30203 668 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 MATKP42679 507 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 C19orf57Q0VDD7 668 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 HLA-BQ31612 363 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 HECTD3Q5T447 861 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 DCAF12L1Q5VU92 463 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 DPH6Q7L8W6 267 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 TMPRSS7Q7RTY8 843 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 FAM124AQ86V42 546 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 NUP93Q8N1F7 819 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 GPD1LQ8N335 351 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 RDH13Q8NBN7 331 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 SCAMP5Q8TAC9 235 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 FOXJ1Q92949 421 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 OTUB2Q96DC9 234 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 XPO6Q96QU8 1125 aaKnown RBP9.68□□□□□ -0.86
CCDC171-204ENST00000470191 KCNK16Q96T55 309 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 B3GNT5Q9BYG0 378 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 PLK2Q9NYY3 685 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 GMIPQ9P107 970 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 EIF2B4Q9UI10 523 aaKnown RBP9.68□□□□□ -0.86
CCDC171-204ENST00000470191 LAMA5O15230 3695 aa9.68□□□□□ -0.86
CCDC171-204ENST00000470191 MYLKQ15746 1914 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 A0A1B0GVT2 93 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 A8MXQ7 604 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 KCNJ18B7U540 433 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 KCNK3O14649 394 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 SLC26A4O43511 780 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 PPP1R37O75864 691 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 RTN3O95197 1032 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-204ENST00000470191 CER1O95813 267 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 GARTP22102 1010 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 ITPKBP27987 946 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 LONP1P36776 959 aaKnown RBP9.67□□□□□ -0.86
CCDC171-204ENST00000470191 ABCG1P45844 678 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 CLDN6P56747 220 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 BNC1Q01954 994 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 USP49Q70CQ1 688 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 GLRX5Q86SX6 157 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 PDZD8Q8NEN9 1154 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 ELMO3Q96BJ8 720 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 EPSTI1Q96J88 318 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 STRA6Q9BX79 667 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 ZDHHC5Q9C0B5 715 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 ELOVL4Q9GZR5 314 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 CD248Q9HCU0 757 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 TOR4AQ9NXH8 423 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 NXF1Q9UBU9 619 aaKnown RBP9.67□□□□□ -0.86
CCDC171-204ENST00000470191 KIF3AQ9Y496 699 aa9.67□□□□□ -0.86
CCDC171-204ENST00000470191 PLXNA2O75051 1894 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 PLK4O00444 970 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 BCAT2O15382 392 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-204ENST00000470191 TBX18O95935 607 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 CST3P01034 146 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-204ENST00000470191 DLATP10515 647 aaKnown RBP9.66□□□□□ -0.86
CCDC171-204ENST00000470191 GAP43P17677 238 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 GJB2P29033 226 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 DGKGP49619 791 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 CSNK1EP49674 416 aaKnown RBP9.66□□□□□ -0.86
CCDC171-204ENST00000470191 PGFP49763 221 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 TNNC1P63316 161 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 IL9RQ01113 521 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 DUOXA2Q1HG44 320 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 WDR72Q3MJ13 1102 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 FUT11Q495W5 492 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 DHRS13Q6UX07 377 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 TRAPPC11Q7Z392 1133 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 LIMS2Q7Z4I7 341 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 CBWD2Q8IUF1 395 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 KIAA1958Q8N8K9 716 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms