RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 A0A1W2PQ64 194 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 A0A1W2PQD8 194 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 TBC1D3BA6NDS4 549 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 TULP3O75386 442 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 TRIM49P0CI25 452 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 TRIM49CP0CI26 452 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 HNRNPLP14866 589 aaKnown RBP eCLIP18.46■□□□□ 0.55
COL7A1-208ENST00000470076 KCNA4P22459 653 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 PSMC2P35998 433 aaKnown RBP18.46■□□□□ 0.55
COL7A1-208ENST00000470076 ATP5C1P36542 298 aaKnown RBP18.46■□□□□ 0.55
COL7A1-208ENST00000470076 PGFP49763 221 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 PPP3CAQ08209 521 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 GOLGA8FQ08AF8 430 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 GOLGA8DPQ0D2H9 430 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 ANO4Q32M45 955 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 KRBA2Q6ZNG9 492 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 TRMT11Q7Z4G4 463 aaKnown RBP18.46■□□□□ 0.55
COL7A1-208ENST00000470076 TMEM25Q86YD3 366 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 NAT16Q8N8M0 369 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 CCDC150Q8NCX0 1101 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 WBP2Q969T9 261 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 CHAMP1Q96JM3 812 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 SPACA7Q96KW9 195 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 TWNKQ96RR1 684 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 EDEM2Q9BV94 578 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 KLF16Q9BXK1 252 aaPredicted RBP18.46■□□□□ 0.55
COL7A1-208ENST00000470076 MAPK8IP1Q9UQF2 711 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 PCDHA5Q9Y5H7 936 aa18.46■□□□□ 0.55
COL7A1-208ENST00000470076 KMT2BQ9UMN6 2715 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-208ENST00000470076 MAP1BP46821 2468 aaKnown RBP18.45■□□□□ 0.54
COL7A1-208ENST00000470076 PLXND1Q9Y4D7 1925 aa18.45■□□□□ 0.54
COL7A1-208ENST00000470076 HHLA1C9JL84 531 aa18.45■□□□□ 0.54
COL7A1-208ENST00000470076 ACO1P21399 889 aaKnown RBP18.45■□□□□ 0.54
COL7A1-208ENST00000470076 BCKDHBP21953 392 aa18.45■□□□□ 0.54
COL7A1-208ENST00000470076 P2RY2P41231 377 aa18.45■□□□□ 0.54
COL7A1-208ENST00000470076 ADAM9Q13443 819 aa18.45■□□□□ 0.54
COL7A1-208ENST00000470076 BYSLQ13895 437 aaKnown RBP18.45■□□□□ 0.54
COL7A1-208ENST00000470076 KLHDC10Q6PID8 442 aa18.45■□□□□ 0.54
COL7A1-208ENST00000470076 GPRIN1Q7Z2K8 1008 aa18.45■□□□□ 0.54
COL7A1-208ENST00000470076 CYP2U1Q7Z449 544 aa18.45■□□□□ 0.54
COL7A1-208ENST00000470076 TERB1Q8NA31 727 aa18.45■□□□□ 0.54
COL7A1-208ENST00000470076 LSM14BQ9BX40 385 aaKnown RBP18.45■□□□□ 0.54
COL7A1-208ENST00000470076 APOBEC3GQ9HC16 384 aaKnown RBP18.45■□□□□ 0.54
COL7A1-208ENST00000470076 TMEM8AQ9HCN3 771 aa18.45■□□□□ 0.54
COL7A1-208ENST00000470076 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.45■□□□□ 0.54
COL7A1-208ENST00000470076 BCCIPQ9P287 314 aaKnown RBP eCLIP18.45■□□□□ 0.54
COL7A1-208ENST00000470076 LSM7Q9UK45 103 aaKnown RBP18.45■□□□□ 0.54
COL7A1-208ENST00000470076 KHNYNO15037 678 aaKnown RBP18.44■□□□□ 0.54
COL7A1-208ENST00000470076 CYP26A1O43174 497 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 GREM1O60565 184 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 ADAM23O75077 832 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 CILPO75339 1184 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 TBX18O95935 607 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 CD58P19256 250 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 GTF2H1P32780 548 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 PSEN1P49768 467 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 MCCD1P59942 119 aaPredicted RBP18.44■□□□□ 0.54
COL7A1-208ENST00000470076 ZCWPW2Q504Y3 356 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 ZNF513Q8N8E2 541 aaPredicted RBP18.44■□□□□ 0.54
COL7A1-208ENST00000470076 JAKMIP2Q96AA8 810 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 CCDC34Q96HJ3 373 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 FAXDC2Q96IV6 333 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 OSER1Q9NX31 292 aa18.44■□□□□ 0.54
COL7A1-208ENST00000470076 GON4LQ3T8J9 2241 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 CEP295Q9C0D2 2601 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 LNP1A1A4G5 178 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 MAP3K13O43283 966 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 ZNF202O95125 648 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 DHPSP49366 369 aaPredicted RBP18.43■□□□□ 0.54
COL7A1-208ENST00000470076 KIF11P52732 1056 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 EDRF1Q3B7T1 1238 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 C10orf76Q5T2E6 689 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 KRT39Q6A163 491 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 GRAMD4Q6IC98 578 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 LPCAT2Q7L5N7 544 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 ZNF276Q8N554 614 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 TTC39CQ8N584 583 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 HMGB4Q8WW32 186 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 XPO6Q96QU8 1125 aaKnown RBP18.43■□□□□ 0.54
COL7A1-208ENST00000470076 MMRN2Q9H8L6 949 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 NMUR1Q9HB89 426 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 ZDHHC4Q9NPG8 344 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL7A1-208ENST00000470076 MARK1Q9P0L2 795 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 WDR35Q9P2L0 1181 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 DNMT3LQ9UJW3 386 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 CIZ1Q9ULV3 898 aaPredicted RBP18.43■□□□□ 0.54
COL7A1-208ENST00000470076 STARD13Q9Y3M8 1113 aa18.43■□□□□ 0.54
COL7A1-208ENST00000470076 A0A1W2PQH9 124 aa18.42■□□□□ 0.54
COL7A1-208ENST00000470076 TCRBV21S2A2A0A5A6 115 aa18.42■□□□□ 0.54
COL7A1-208ENST00000470076 CACNG3O60359 315 aa18.42■□□□□ 0.54
COL7A1-208ENST00000470076 KCNK5O95279 499 aa18.42■□□□□ 0.54
COL7A1-208ENST00000470076 RARGP13631 454 aa18.42■□□□□ 0.54
COL7A1-208ENST00000470076 PLA2G4AP47712 749 aa18.42■□□□□ 0.54
COL7A1-208ENST00000470076 SPDYCQ5MJ68 293 aa18.42■□□□□ 0.54
COL7A1-208ENST00000470076 N4BP2L1Q5TBK1 243 aaPredicted RBP18.42■□□□□ 0.54
COL7A1-208ENST00000470076 DAB2IPQ5VWQ8 1189 aa18.42■□□□□ 0.54
COL7A1-208ENST00000470076 CCDC186Q7Z3E2 898 aa18.42■□□□□ 0.54
COL7A1-208ENST00000470076 TADA2BQ86TJ2 420 aa18.42■□□□□ 0.54
COL7A1-208ENST00000470076 PGBD3Q8N328 593 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms