RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 MDM4O15151 490 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 ENDOD1O94919 500 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 RFC2P35250 354 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 GRIK1P39086 918 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 BYSLQ13895 437 aaKnown RBP18.92■□□□□ 0.62
SMC4-211ENST00000469858 CA9Q16790 459 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 ERMARDQ5T6L9 678 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 MAP7D3Q8IWC1 876 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 NPY6RQ99463 290 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 MAK16Q9BXY0 300 aaKnown RBP18.92■□□□□ 0.62
SMC4-211ENST00000469858 FAM53CQ9NYF3 392 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 OGFRQ9NZT2 677 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 COX16Q9P0S2 106 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 ASIC3Q9UHC3 531 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 HPCAL4Q9UM19 191 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 M0QYT0 321 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 LTFP02788 710 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 FYNP06241 537 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 ITGB8P26012 769 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 DRG2P55039 364 aaKnown RBP18.91■□□□□ 0.62
SMC4-211ENST00000469858 IFRD2Q12894 506 aaPredicted RBP18.91■□□□□ 0.62
SMC4-211ENST00000469858 PDK2Q15119 407 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 TRIP13Q15645 432 aaPredicted RBP18.91■□□□□ 0.62
SMC4-211ENST00000469858 OTUD1Q5VV17 481 aaPredicted RBP18.91■□□□□ 0.62
SMC4-211ENST00000469858 ZNF280DQ6N043 979 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 FAM131BQ86XD5 332 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 CCDC185Q8N715 623 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 PCDH18Q9HCL0 1135 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 PNPLA8Q9NP80 782 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 GRHL1Q9NZI5 618 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 PCDH10Q9P2E7 1040 aa18.91■□□□□ 0.62
SMC4-211ENST00000469858 NCAM1P13591 858 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 FGFR3P22607 806 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 PLTPP55058 493 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 OTUD4Q01804 1114 aaKnown RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 NME3Q13232 169 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 PTK6Q13882 451 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 PPP6R3Q5H9R7 873 aaPredicted RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 SYDE1Q6ZW31 735 aaPredicted RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 BHLHA9Q7RTU4 235 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 GSTA5Q7RTV2 222 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 NECAB2Q7Z6G3 386 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 SCN4BQ8IWT1 228 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 TSEN2Q8NCE0 465 aaKnown RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 ACTL9Q8TC94 416 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 BCL7CQ8WUZ0 217 aaPredicted RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 NT5C3BQ969T7 300 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 PGLYRP2Q96PD5 576 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 DHX35Q9H5Z1 703 aaKnown RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 VIPAS39Q9H9C1 493 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 AP4E1Q9UPM8 1137 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 ZNF148Q9UQR1 794 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 TRIM43BA6NCK2 446 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 DGKIO75912 1065 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 CSF2RAP15509 400 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 ELAVL2Q12926 359 aaKnown RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 MRPL58Q14197 206 aaKnown RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 NFE2Q16621 373 aaPredicted RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 DRICH1Q6PGQ1 229 aaPredicted RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 ZNF365Q70YC5 407 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 TTC13Q8NBP0 860 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 SCAMP5Q8TAC9 235 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 SLC7A14Q8TBB6 771 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 TRIM43Q96BQ3 446 aaPredicted RBP18.9■□□□□ 0.62
SMC4-211ENST00000469858 FMO2Q99518 471 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 ZDHHC18Q9NUE0 388 aa18.9■□□□□ 0.62
SMC4-211ENST00000469858 TIMP1P01033 207 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 RDXP35241 583 aaKnown RBP18.89■□□□□ 0.61
SMC4-211ENST00000469858 VPS41P49754 854 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 SLC5A3P53794 718 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 VCPP55072 806 aaKnown RBP18.89■□□□□ 0.61
SMC4-211ENST00000469858 ARPP19P56211 112 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 LMNB2Q03252 620 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 DEUP1Q05D60 604 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 PM20D1Q6GTS8 502 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 ZDHHC24Q6UX98 284 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 KRT222Q8N1A0 295 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 ADAM32Q8TC27 787 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 FBXO25Q8TCJ0 367 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 IRGQQ8WZA9 623 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 EDEM1Q92611 657 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 RNF157Q96PX1 679 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 TMEM106CQ9BVX2 250 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 ACBD3Q9H3P7 528 aa18.89■□□□□ 0.61
SMC4-211ENST00000469858 COL4A6Q14031 1691 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 OR6C75A6NL08 312 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 RAG1P15918 1043 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 PECAM1P16284 738 aaPredicted RBP18.88■□□□□ 0.61
SMC4-211ENST00000469858 IL4RP24394 825 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 GBP1P32455 592 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 ALDH7A1P49419 539 aaKnown RBP18.88■□□□□ 0.61
SMC4-211ENST00000469858 DPYSL2Q16555 572 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 RTP2Q5QGT7 225 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 FAM117BQ6P1L5 589 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 BNIPLQ7Z465 357 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 TMCO2Q7Z6W1 182 aaPredicted RBP18.88■□□□□ 0.61
SMC4-211ENST00000469858 SLC35B2Q8TB61 432 aa18.88■□□□□ 0.61
SMC4-211ENST00000469858 NKD2Q969F2 451 aaPredicted RBP18.88■□□□□ 0.61
SMC4-211ENST00000469858 FUBP3Q96I24 572 aaKnown RBP eCLIP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms