RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 COCHO43405 550 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 RTN2O75298 545 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 PRAMEF12O95522 483 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 LTFP02788 710 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 FTLP02792 175 aaPredicted RBP15.5■□□□□ 0.07
COL9A3-209ENST00000469852 RARGP13631 454 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 RRM1P23921 792 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 GBP2P32456 591 aaPredicted RBP15.5■□□□□ 0.07
COL9A3-209ENST00000469852 SLC6A3Q01959 620 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
COL9A3-209ENST00000469852 CCDC122Q5T0U0 273 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 BSPRYQ5W0U4 402 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 TRNP1Q6NT89 227 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 ALKBH5Q6P6C2 394 aaKnown RBP15.5■□□□□ 0.07
COL9A3-209ENST00000469852 VPS36Q86VN1 386 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 ARL14EPQ8N8R7 260 aaPredicted RBP15.5■□□□□ 0.07
COL9A3-209ENST00000469852 FAM149B1Q96BN6 582 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 CCDC42Q96M95 316 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 BAG1Q99933 345 aaPredicted RBP15.5■□□□□ 0.07
COL9A3-209ENST00000469852 PHF7Q9BWX1 381 aaPredicted RBP15.5■□□□□ 0.07
COL9A3-209ENST00000469852 DEF6Q9H4E7 631 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 SLITRK6Q9H5Y7 841 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 TASP1Q9H6P5 420 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 CDH7Q9ULB5 785 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 AKR1B10O60218 316 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 TLR5O60602 858 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 OLFM2O95897 454 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 CALB1P05937 261 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 FCARP24071 287 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 PPP3CCP48454 512 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 GSDMDP57764 484 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 PITX1P78337 314 aaPredicted RBP15.49■□□□□ 0.07
COL9A3-209ENST00000469852 ZXDBP98169 803 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 ZNF268Q14587 947 aaPredicted RBP15.49■□□□□ 0.07
COL9A3-209ENST00000469852 ARHGAP15Q53QZ3 475 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 FAM78AQ5JUQ0 283 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 FAM102AQ5T9C2 384 aaPredicted RBP15.49■□□□□ 0.07
COL9A3-209ENST00000469852 SYPL2Q5VXT5 272 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 SLC26A9Q7LBE3 791 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 JOSD2Q8TAC2 188 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 RIN3Q8TB24 985 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 RSPRY1Q96DX4 576 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 RPGRIP1Q96KN7 1286 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 ADAM33Q9BZ11 813 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 METTL5Q9NRN9 209 aaKnown RBP15.49■□□□□ 0.07
COL9A3-209ENST00000469852 CLIC5Q9NZA1 410 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 NAALADL1Q9UQQ1 740 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 CCL26Q9Y258 94 aa15.49■□□□□ 0.07
COL9A3-209ENST00000469852 GOLGA6L6A8MZA4 724 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 LAMP2P13473 410 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 ABCB4P21439 1286 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 PSEN1P49768 467 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 GSCP56915 257 aaPredicted RBP15.48■□□□□ 0.07
COL9A3-209ENST00000469852 PUS10Q3MIT2 529 aaKnown RBP15.48■□□□□ 0.07
COL9A3-209ENST00000469852 HECTD3Q5T447 861 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 BTBD8Q5XKL5 378 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 ZDHHC17Q8IUH5 632 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 TMTC1Q8IUR5 882 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 CMTM8Q8IZV2 173 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 ARHGAP18Q8N392 663 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 EMC1Q8N766 993 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 MSANTD4Q8NCY6 345 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 ZSCAN18Q8TBC5 510 aaPredicted RBP15.48■□□□□ 0.07
COL9A3-209ENST00000469852 ZNF653Q96CK0 615 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 ARHGEF26Q96DR7 871 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 ZFRQ96KR1 1074 aaKnown RBP15.48■□□□□ 0.07
COL9A3-209ENST00000469852 ASB16Q96NS5 453 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 SLC2A13Q96QE2 648 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 THAP2Q9H0W7 228 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 ABCC13Q9NSE7 274 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.48■□□□□ 0.07
COL9A3-209ENST00000469852 TMEM59LQ9UK28 342 aa15.48■□□□□ 0.07
COL9A3-209ENST00000469852 TRAV19A0A0A6YYK7 116 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 SART1O43290 800 aaKnown RBP15.47■□□□□ 0.07
COL9A3-209ENST00000469852 DAB1O75553 588 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 HDCP19113 662 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 TFE3P19532 575 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-209ENST00000469852 DDX6P26196 483 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL9A3-209ENST00000469852 FLT3P36888 993 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 SCNN1AP37088 669 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 VIPR2P41587 438 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 TUBP50607 506 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 GALCP54803 685 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 SNX16P57768 344 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 RNASE9P60153 205 aaKnown RBP15.47■□□□□ 0.07
COL9A3-209ENST00000469852 YWHAZP63104 245 aaKnown RBP15.47■□□□□ 0.07
COL9A3-209ENST00000469852 EFEMP1Q12805 493 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 EFHC1Q5JVL4 640 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 C10orf120Q5SQS8 335 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 PPP1R15BQ5SWA1 713 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 OTUD1Q5VV17 481 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-209ENST00000469852 TOGARAM2Q6ZUX3 1019 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 OTOP3Q7RTS5 596 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 ARID3BQ8IVW6 561 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-209ENST00000469852 LRRC8AQ8IWT6 810 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 DEFB106AQ8N104 65 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 C3orf20Q8ND61 904 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 ADAM32Q8TC27 787 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 FGF14Q92915 247 aa15.47■□□□□ 0.07
COL9A3-209ENST00000469852 USP13Q92995 863 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms