RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 TBC1D20Q96BZ9 403 aa4.79□□□□□ -1.64
VPS8-220ENST00000469713 RSPRY1Q96DX4 576 aa4.79□□□□□ -1.64
VPS8-220ENST00000469713 PRR25Q96S07 402 aa4.79□□□□□ -1.64
VPS8-220ENST00000469713 TP63Q9H3D4 680 aaPredicted RBP4.79□□□□□ -1.64
VPS8-220ENST00000469713 TRIM36Q9NQ86 728 aa4.79□□□□□ -1.64
VPS8-220ENST00000469713 ARHGEF3Q9NR81 526 aa4.79□□□□□ -1.64
VPS8-220ENST00000469713 HERC5Q9UII4 1024 aaKnown RBP4.79□□□□□ -1.64
VPS8-220ENST00000469713 GABRQQ9UN88 632 aa4.79□□□□□ -1.64
VPS8-220ENST00000469713 MYRFQ9Y2G1 1151 aa4.79□□□□□ -1.64
VPS8-220ENST00000469713 GPR52Q9Y2T5 361 aa4.79□□□□□ -1.64
VPS8-220ENST00000469713 DGKBQ9Y6T7 804 aa4.79□□□□□ -1.64
VPS8-220ENST00000469713 PNMA6EA0A0J9YXQ4 647 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 LINC00473A8K010 186 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 AP4M1O00189 453 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 PMPCBO75439 489 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 TAF5LO75529 589 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 ACTL6BO94805 426 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 ELFN1P0C7U0 828 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 CD19P15391 556 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 TNFRSF1AP19438 455 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 DRD1P21728 446 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 GKP32189 559 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 MCM5P33992 734 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 MCM7P33993 719 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 PLA2G5P39877 138 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 PNLIPRP1P54315 467 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 EIF4A1P60842 406 aaKnown RBP4.78□□□□□ -1.64
VPS8-220ENST00000469713 TMEM196Q5HYL7 178 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 HECTD2Q5U5R9 776 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 TANGO2Q6ICL3 276 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 RINT1Q6NUQ1 792 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 KLHL17Q6TDP4 642 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 Q6ZWC4 215 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 ZNF551Q7Z340 670 aaPredicted RBP4.78□□□□□ -1.64
VPS8-220ENST00000469713 RAB11FIP4Q86YS3 637 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 CPXCR1Q8N123 301 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 PPM1EQ8WY54 764 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 CTHRC1Q96CG8 243 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 ISCA1Q9BUE6 129 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.78□□□□□ -1.64
VPS8-220ENST00000469713 DLL3Q9NYJ7 618 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 LRIT1Q9P2V4 623 aa4.78□□□□□ -1.64
VPS8-220ENST00000469713 NKX1-2Q9UD57 310 aaPredicted RBP4.78□□□□□ -1.64
VPS8-220ENST00000469713 KIAA0355O15063 1070 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 PRKCBP05771 671 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 EBLN1P0CF75 366 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 DHRS4L1P0CG22 281 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 TMEM225BP0DP42 221 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 CREB1P16220 341 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 ENGP17813 658 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 ITPKBP27987 946 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 CYP2C18P33260 490 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 GRIA3P42263 894 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 TAP1Q03518 808 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 ABHD18Q0P651 414 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 BIRC3Q13489 604 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 TAF5Q15542 800 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 BTBD16Q32M84 506 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 P3H1Q32P28 736 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 PLAC9Q5JTB6 97 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 GRHL2Q6ISB3 625 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 USP51Q70EK9 711 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 ZNF354CQ86Y25 554 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 Q8N1X5 172 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 GALNT15Q8N3T1 639 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 SCAMP5Q8TAC9 235 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 OTUD7AQ8TE49 926 aaPredicted RBP4.77□□□□□ -1.65
VPS8-220ENST00000469713 NEU4Q8WWR8 484 aaPredicted RBP4.77□□□□□ -1.65
VPS8-220ENST00000469713 TRIM63Q969Q1 353 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 NUDT22Q9BRQ3 303 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 RTKNQ9BST9 563 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 PABPC3Q9H361 631 aaKnown RBP4.77□□□□□ -1.65
VPS8-220ENST00000469713 ITM2CQ9NQX7 267 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 SERTAD4Q9NUC0 356 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 FOXJ2Q9P0K8 574 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 ASAP1Q9ULH1 1129 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 ST3GAL5Q9UNP4 418 aa4.77□□□□□ -1.65
VPS8-220ENST00000469713 CCDC189A1A4V9 331 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 A8MVJ9 347 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 H0YIZ8 118 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 CES2O00748 559 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 RPP40O75818 363 aaKnown RBP4.76□□□□□ -1.65
VPS8-220ENST00000469713 TTLL1O95922 423 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 NDUFB7P17568 137 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 KRT4P19013 534 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 TACR2P21452 398 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 POLE2P56282 527 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 AP2B1P63010 937 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 PSG6Q00889 435 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 DEUP1Q05D60 604 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 ST3GAL2Q16842 350 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 ZXDCQ2QGD7 858 aaPredicted RBP4.76□□□□□ -1.65
VPS8-220ENST00000469713 AASDHQ4L235 1098 aaPredicted RBP4.76□□□□□ -1.65
VPS8-220ENST00000469713 MSANTD2Q6P1R3 559 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 PIK3AP1Q6ZUJ8 805 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 PARS2Q7L3T8 475 aaKnown RBP4.76□□□□□ -1.65
VPS8-220ENST00000469713 TTC30AQ86WT1 665 aa4.76□□□□□ -1.65
VPS8-220ENST00000469713 SLC44A2Q8IWA5 706 aaPredicted RBP4.76□□□□□ -1.65
VPS8-220ENST00000469713 CCDC117Q8IWD4 279 aaPredicted RBP4.76□□□□□ -1.65
VPS8-220ENST00000469713 SMAP1Q8IYB5 467 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms