RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SLC27A1Q6PCB7 646 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 MAP7D3Q8IWC1 876 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 ERP27Q96DN0 273 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 L3MBTL3Q96JM7 780 aaPredicted RBP15.27■□□□□ 0.04
CBWD3-205ENST00000469687 PLAC1Q9HBJ0 212 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 GOLGA2P5Q9HBQ8 144 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 NOD2Q9HC29 1040 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 SPTLC1O15269 473 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 CHADO15335 359 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 ZWINTO95229 277 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 ZBED1O96006 694 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 APRTP07741 180 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 LCP1P13796 627 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 IBSPP21815 317 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-205ENST00000469687 GBE1Q04446 702 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 FAAP100Q0VG06 881 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 SLC10A2Q12908 348 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-205ENST00000469687 PTK7Q13308 1070 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 SWT1Q5T5J6 900 aaKnown RBP15.26■□□□□ 0.03
CBWD3-205ENST00000469687 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 ASRGL1Q7L266 308 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 CAND1Q86VP6 1230 aaKnown RBP15.26■□□□□ 0.03
CBWD3-205ENST00000469687 SESTD1Q86VW0 696 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 TTC39CQ8N584 583 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 KBTBD7Q8WVZ9 684 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 TMEM40Q8WWA1 233 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 PTPRN2Q92932 1015 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 CYTH2Q99418 400 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 PLCD4Q9BRC7 762 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 PLEKHA5Q9HAU0 1116 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 PAK5Q9P286 719 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 HESX1Q9UBX0 185 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 MFHAS1Q9Y4C4 1052 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 CXorf49A8MYA2 514 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-205ENST00000469687 SMAPO00193 183 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 C1QAP02745 245 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 TGM2P21980 687 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 CYP2F1P24903 491 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 GRB14Q14449 540 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 E2F5Q15329 346 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 ALKAL1Q6UXT8 129 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-205ENST00000469687 CEP57Q86XR8 500 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 C10orf82Q8WW14 230 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 TEKT4Q8WW24 435 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 SLC44A1Q8WWI5 657 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 NDRG1Q92597 394 aaKnown RBP15.26■□□□□ 0.03
CBWD3-205ENST00000469687 TINF2Q9BSI4 451 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 GCOM2Q9BZD3 368 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-205ENST00000469687 NRDE2Q9H7Z3 1164 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 ETNK1Q9HBU6 452 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 SSU72Q9NP77 194 aaKnown RBP15.26■□□□□ 0.03
CBWD3-205ENST00000469687 ETNK2Q9NVF9 386 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 STK38LQ9Y2H1 464 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 TTLL3Q9Y4R7 772 aa15.26■□□□□ 0.03
CBWD3-205ENST00000469687 BRCA2P51587 3418 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 STRNO43815 780 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 GBP2P32456 591 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-205ENST00000469687 ZNF200P98182 395 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-205ENST00000469687 OVGP1Q12889 678 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 PLEKHG4Q58EX7 1191 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 CCDC185Q8N715 623 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 NETO2Q8NC67 525 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 BEST2Q8NFU1 509 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 GTF3C2Q8WUA4 911 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-205ENST00000469687 TBC1D31Q96DN5 1066 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 RTP4Q96DX8 246 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 DHX35Q9H5Z1 703 aaKnown RBP15.25■□□□□ 0.03
CBWD3-205ENST00000469687 FAM124BQ9H5Z6 455 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-205ENST00000469687 ARHGEF3Q9NR81 526 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 NUMBLQ9Y6R0 609 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 MDM4O15151 490 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 DYNC1LI2O43237 492 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-205ENST00000469687 SMIM10L2AP0DMW4 78 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 SMIM10L2BP0DMW5 78 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 CCNB1P14635 433 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 ATP2A2P16615 1042 aaKnown RBP15.25■□□□□ 0.03
CBWD3-205ENST00000469687 L1CAMP32004 1257 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 NOTUMQ6P988 496 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 PYROXD2Q8N2H3 581 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 LRRC52Q8N7C0 313 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 TMEM237Q96Q45 408 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 ZNF670Q9BS34 389 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 C11orf84Q9BUA3 381 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-205ENST00000469687 TRIM6Q9C030 488 aaPredicted RBP15.25■□□□□ 0.03
CBWD3-205ENST00000469687 ABHD16BQ9H3Z7 469 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 POPDC2Q9HBU9 364 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 NPHS2Q9NP85 383 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 CYLDQ9NQC7 956 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 MTMR10Q9NXD2 777 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 DERAQ9Y315 318 aa15.25■□□□□ 0.03
CBWD3-205ENST00000469687 BCLAF3A2AJT9 711 aaKnown RBP15.24■□□□□ 0.03
CBWD3-205ENST00000469687 UNC5CO95185 931 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 METTL18O95568 372 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 MT-ND3P03897 115 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 SETSIPP0DME0 302 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 PYGBP11216 843 aa15.24■□□□□ 0.03
CBWD3-205ENST00000469687 TARSP26639 723 aaKnown RBP15.24■□□□□ 0.03
CBWD3-205ENST00000469687 SOX4Q06945 474 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms