RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 NACA2Q9H009 215 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 NMUR1Q9HB89 426 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 DMAC2Q9NW81 257 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 PILRBQ9UKJ0 227 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 ZMIZ1Q9ULJ6 1067 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 RAD54BQ9Y620 910 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 WDFY3Q8IZQ1 3526 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 ASCC3Q8N3C0 2202 aaKnown RBP12.97□□□□□ -0.33
HDAC3-204ENST00000469207 UBE4BO95155 1302 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 SPAARA0A1B0GVQ0 90 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 A0A1W2PQF6 199 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.97□□□□□ -0.33
HDAC3-204ENST00000469207 TLR5O60602 858 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 CFIP05156 583 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 HOXB2P14652 356 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 CSRP1P21291 193 aaKnown RBP12.97□□□□□ -0.33
HDAC3-204ENST00000469207 ME1P48163 572 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 FAM193AP78312 1265 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 RPL6Q02878 288 aaKnown RBP12.97□□□□□ -0.33
HDAC3-204ENST00000469207 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 RESP18Q5W5W9 173 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 LYSMD4Q5XG99 296 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 BTBD8Q5XKL5 378 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 SV2AQ7L0J3 742 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 CRYBG2Q8N1P7 616 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 TERB1Q8NA31 727 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 OTUB2Q96DC9 234 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 PAGE5Q96GU1 130 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 TNIP3Q96KP6 325 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 SPACA7Q96KW9 195 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 GTPBP2Q9BX10 602 aaKnown RBP12.97□□□□□ -0.33
HDAC3-204ENST00000469207 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
HDAC3-204ENST00000469207 NUSAP1Q9BXS6 441 aaKnown RBP12.97□□□□□ -0.33
HDAC3-204ENST00000469207 BACH2Q9BYV9 841 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 DNAJC17Q9NVM6 304 aaKnown RBP12.97□□□□□ -0.33
HDAC3-204ENST00000469207 PLK2Q9NYY3 685 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 CALCOCO1Q9P1Z2 691 aa12.97□□□□□ -0.33
HDAC3-204ENST00000469207 EVLQ9UI08 416 aaPredicted RBP12.97□□□□□ -0.33
HDAC3-204ENST00000469207 HHLA1C9JL84 531 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 NEDD8-MDP1E9PL57 170 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 CYP26A1O43174 497 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 HOXC11O43248 304 aaPredicted RBP12.96□□□□□ -0.33
HDAC3-204ENST00000469207 TYRP14679 529 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 MAOBP27338 520 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 NTSR1P30989 418 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 DNM1Q05193 864 aaKnown RBP12.96□□□□□ -0.33
HDAC3-204ENST00000469207 SGSM1Q2NKQ1 1148 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 HSF5Q4G112 596 aaPredicted RBP12.96□□□□□ -0.33
HDAC3-204ENST00000469207 SLC23A3Q6PIS1 610 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 HTR3DQ70Z44 454 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 SLC41A1Q8IVJ1 513 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 BBS2Q9BXC9 721 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 KCTD10Q9H3F6 313 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 CSNK1G1Q9HCP0 422 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 FAM13BQ9NYF5 915 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 CGNQ9P2M7 1197 aaKnown RBP12.96□□□□□ -0.33
HDAC3-204ENST00000469207 CYP8B1Q9UNU6 501 aa12.96□□□□□ -0.33
HDAC3-204ENST00000469207 TNRC6BQ9UPQ9 1833 aaKnown RBP12.96□□□□□ -0.33
HDAC3-204ENST00000469207 PI4KAP42356 2102 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 ATP8B3O60423 1300 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 IGHV1OR15-9A0A0B4J2B8 117 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 A0A1B0GVL5 298 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 A0A1W2PQH9 124 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 ACTN4O43707 911 aaKnown RBP12.95□□□□□ -0.34
HDAC3-204ENST00000469207 HYAL3O43820 417 aaPredicted RBP12.95□□□□□ -0.34
HDAC3-204ENST00000469207 F13A1P00488 732 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 HLA-DRAP01903 254 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 CISD3P0C7P0 127 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 ZSCAN22P10073 491 aaPredicted RBP12.95□□□□□ -0.34
HDAC3-204ENST00000469207 RARGP13631 454 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 NDUFV2P19404 249 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 ACO1P21399 889 aaKnown RBP12.95□□□□□ -0.34
HDAC3-204ENST00000469207 ATP5C1P36542 298 aaKnown RBP12.95□□□□□ -0.34
HDAC3-204ENST00000469207 ASPAP45381 313 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 TUBP50607 506 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 ZNF33AQ06730 810 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 LMAN2Q12907 356 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 ZACNQ401N2 412 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 CEP135Q66GS9 1140 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 GRAMD4Q6IC98 578 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 CLEC20AQ6ZU45 233 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 CHPFQ8IZ52 775 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 IPO4Q8TEX9 1081 aaKnown RBP12.95□□□□□ -0.34
HDAC3-204ENST00000469207 ADAM33Q9BZ11 813 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 MAGEF1Q9HAY2 307 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 APOBEC3GQ9HC16 384 aaKnown RBP12.95□□□□□ -0.34
HDAC3-204ENST00000469207 TLR8Q9NR97 1041 aaKnown RBP12.95□□□□□ -0.34
HDAC3-204ENST00000469207 COMMD8Q9NX08 183 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 CACNA2D2Q9NY47 1150 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 STARD13Q9Y3M8 1113 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 AKAP13Q12802 2813 aa12.95□□□□□ -0.34
HDAC3-204ENST00000469207 MYH10P35580 1976 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 CEP192Q8TEP8 1941 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 PCNX2A6NKB5 2137 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 CHD6Q8TD26 2715 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 AP5Z1O43299 807 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 KIF20AO95235 890 aa12.94□□□□□ -0.34
HDAC3-204ENST00000469207 ASS1P00966 412 aaKnown RBP12.94□□□□□ -0.34
HDAC3-204ENST00000469207 NR3C1P04150 777 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms