RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 GOLGA8DPQ0D2H9 430 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 STIM1Q13586 685 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 SF3A2Q15428 464 aaKnown RBP11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 CBWD6Q4V339 395 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 USP39Q53GS9 565 aaKnown RBP11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 CBWD3Q5JTY5 395 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 CBWD5Q5RIA9 395 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 KLHL10Q6JEL2 608 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 PRR23CQ6ZRP0 262 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 TPGS1Q6ZTW0 290 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 HTR3DQ70Z44 454 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 MIB1Q86YT6 1006 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 TTC39CQ8N584 583 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 C12orf50Q8NA57 414 aaPredicted RBP11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 SLC4A11Q8NBS3 891 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 TIGD1Q96MW7 591 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 KLF16Q9BXK1 252 aaPredicted RBP11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 TPSD1Q9BZJ3 242 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 SPHK2Q9NRA0 654 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 EBF1Q9UH73 591 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 DNMT3LQ9UJW3 386 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 LSM7Q9UK45 103 aaKnown RBP11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 CEP250Q9BV73 2442 aa11.21□□□□□ -0.61
TGFBR3-205ENST00000468996 PTPRDP23468 1912 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 PSMA7O14818 248 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 TRIM24O15164 1050 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 TULP3O75386 442 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 ALDH1A2O94788 518 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 RHOBTB1O94844 696 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 HMBSP08397 361 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 RALAP11233 206 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 CD19P15391 556 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 EIF2DP41214 584 aaKnown RBP11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 TNFRSF4P43489 277 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 SLC8A3P57103 927 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 MCCD1P59942 119 aaPredicted RBP11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 LRRC63Q05C16 580 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 ELF2Q15723 593 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 CRY1Q16526 586 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 PLK5Q496M5 336 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 AASDHQ4L235 1098 aaPredicted RBP11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 TMEM92Q6UXU6 159 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 NUDT18Q6ZVK8 323 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 SCD5Q86SK9 330 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 PGBD3Q8N328 593 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 IL17RCQ8NAC3 791 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 BHMTQ93088 406 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 LOXL4Q96JB6 756 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 ZC3H10Q96K80 434 aaKnown RBP11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 RTKNQ9BST9 563 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 BBS2Q9BXC9 721 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 GTPBP4Q9BZE4 634 aaKnown RBP11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 SMOC1Q9H4F8 434 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 CYLDQ9NQC7 956 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 BCCIPQ9P287 314 aaKnown RBP eCLIP11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 MMP17Q9ULZ9 603 aa11.2□□□□□ -0.62
TGFBR3-205ENST00000468996 A0A0A0MRY4 1105 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 NEDD8-MDP1E9PL57 170 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 SGK1O00141 431 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 BIN1O00499 593 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 SLC16A3O15427 465 aaKnown RBP11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 MAP3K13O43283 966 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 TYRP14679 529 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 KCNA4P22459 653 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 WASP42768 502 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 PSEN1P49768 467 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 CREB5Q02930 508 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 EFEMP1Q12805 493 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 CUL2Q13617 745 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 CCDC40Q4G0X9 1142 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 PREPLQ4J6C6 727 aaPredicted RBP11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 COBLL1Q53SF7 1204 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 EOGTQ5NDL2 527 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 C10orf76Q5T2E6 689 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 RSRC2Q7L4I2 434 aaKnown RBP11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 TADA2BQ86TJ2 420 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 PIGZQ86VD9 579 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 ANKRD52Q8NB46 1076 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 SPATA20Q8TB22 786 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 UBA3Q8TBC4 463 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 NETO1Q8TDF5 533 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 ERLEC1Q96DZ1 483 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 DHTKD1Q96HY7 919 aaPredicted RBP11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 FAXDC2Q96IV6 333 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 XPO6Q96QU8 1125 aaKnown RBP11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 DUSP15Q9H1R2 295 aaPredicted RBP11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 PNPLA8Q9NP80 782 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 POLMQ9NP87 494 aaPredicted RBP11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 DNAJC17Q9NVM6 304 aaKnown RBP11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 WDR35Q9P2L0 1181 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 RASAL2Q9UJF2 1139 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 MAN1B1Q9UKM7 699 aa11.19□□□□□ -0.62
TGFBR3-205ENST00000468996 HOXC11O43248 304 aaPredicted RBP11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 FOXD2O60548 495 aaPredicted RBP11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 GREM1O60565 184 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 GADD45BO75293 160 aaPredicted RBP11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 EPN2O95208 641 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 ZNF806P0C7X5 589 aa11.18□□□□□ -0.62
TGFBR3-205ENST00000468996 HNRNPLP14866 589 aaKnown RBP eCLIP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms