RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 GIPC2Q8TF65 315 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 CTNNBL1Q8WYA6 563 aaPredicted RBP11.81□□□□□ -0.52
MSH5-214ENST00000468602 RFFLQ8WZ73 363 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 SMG7Q92540 1137 aaKnown RBP11.81□□□□□ -0.52
MSH5-214ENST00000468602 FBXO32Q969P5 355 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 RIPOR3Q96MK2 946 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 NCAPGQ9BPX3 1015 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 C11orf70Q9BRQ4 267 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 IGFLR1Q9H665 355 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 NMUR1Q9HB89 426 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 ST7Q9NRC1 585 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 SPTLC3Q9NUV7 552 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 CLDND1Q9NY35 253 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.81□□□□□ -0.52
MSH5-214ENST00000468602 GDE1Q9NZC3 331 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 TRPM5Q9NZQ8 1165 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 CD207Q9UJ71 328 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 DOCK8Q8NF50 2099 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 CACNA1AO00555 2505 aa11.81□□□□□ -0.52
MSH5-214ENST00000468602 MYO16Q9Y6X6 1858 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 CCL16O15467 120 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 KRT3P12035 628 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 LCP1P13796 627 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 SSTR3P32745 418 aaPredicted RBP11.8□□□□□ -0.52
MSH5-214ENST00000468602 CCR2P41597 374 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 ARHGAP25P42331 645 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 SLC7A9P82251 487 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 RING1Q06587 406 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 SMAD4Q13485 552 aaKnown RBP11.8□□□□□ -0.52
MSH5-214ENST00000468602 SLC25A52Q3SY17 297 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 PDZD4Q76G19 769 aaPredicted RBP11.8□□□□□ -0.52
MSH5-214ENST00000468602 RNF10Q8N5U6 811 aaKnown RBP11.8□□□□□ -0.52
MSH5-214ENST00000468602 STKLD1Q8NE28 680 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 SHKBP1Q8TBC3 707 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 HLA-CQ95604 372 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 PIWIL1Q96J94 861 aaKnown RBP11.8□□□□□ -0.52
MSH5-214ENST00000468602 FAM161BQ96MY7 647 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 NPY6RQ99463 290 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 THAP2Q9H0W7 228 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 TASP1Q9H6P5 420 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 SYNCQ9H7C4 482 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 SEPT11Q9NVA2 429 aaKnown RBP11.8□□□□□ -0.52
MSH5-214ENST00000468602 OSER1Q9NX31 292 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 OBP2AQ9NY56 170 aa11.8□□□□□ -0.52
MSH5-214ENST00000468602 CNOT8Q9UFF9 292 aaKnown RBP11.8□□□□□ -0.52
MSH5-214ENST00000468602 NUP210Q8TEM1 1887 aaPredicted RBP11.79□□□□□ -0.52
MSH5-214ENST00000468602 A0A1W2PQH9 124 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 IGLV3-27P01718 113 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 CCDC175P0C221 793 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 RALAP11233 206 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 GABRR2P28476 465 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 MAN1A1P33908 653 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 KPNA1P52294 538 aaPredicted RBP11.79□□□□□ -0.52
MSH5-214ENST00000468602 ZNF143P52747 638 aaPredicted RBP11.79□□□□□ -0.52
MSH5-214ENST00000468602 TAF12Q16514 161 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 SLC5A9Q2M3M2 681 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 HECTD3Q5T447 861 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 ACBD5Q5T8D3 534 aaPredicted RBP11.79□□□□□ -0.52
MSH5-214ENST00000468602 OR6B2Q6IFH4 312 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 TMC5Q6UXY8 1006 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 STRADAQ7RTN6 431 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 GRASPQ7Z6J2 395 aaPredicted RBP11.79□□□□□ -0.52
MSH5-214ENST00000468602 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 FEZF2Q8TBJ5 459 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 GPR152Q8TDT2 470 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 CLEC4CQ8WTT0 213 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 MRPS31Q92665 395 aaKnown RBP11.79□□□□□ -0.52
MSH5-214ENST00000468602 GOLGA1Q92805 767 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 AZIN2Q96A70 460 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 ZNF653Q96CK0 615 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 CORO1BQ9BR76 489 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 PACSIN1Q9BY11 444 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 IRX2Q9BZI1 471 aaPredicted RBP11.79□□□□□ -0.52
MSH5-214ENST00000468602 TSGA10Q9BZW7 698 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 SMOC2Q9H3U7 446 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 GMIPQ9P107 970 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 RAPGEFL1Q9UHV5 662 aa11.79□□□□□ -0.52
MSH5-214ENST00000468602 PRUNE2Q8WUY3 3088 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 EYSQ5T1H1 3165 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 TLR5O60602 858 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 F9P00740 461 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 PTMAP06454 111 aaKnown RBP11.78□□□□□ -0.52
MSH5-214ENST00000468602 RARGP13631 454 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 RFC1P35251 1148 aaPredicted RBP11.78□□□□□ -0.52
MSH5-214ENST00000468602 ATP5C1P36542 298 aaKnown RBP11.78□□□□□ -0.52
MSH5-214ENST00000468602 FLT3P36888 993 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 PGFP49763 221 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 PIGHQ14442 188 aaPredicted RBP11.78□□□□□ -0.52
MSH5-214ENST00000468602 CBX2Q14781 532 aaPredicted RBP11.78□□□□□ -0.52
MSH5-214ENST00000468602 SMAD2Q15796 467 aaKnown RBP11.78□□□□□ -0.52
MSH5-214ENST00000468602 ARHGAP15Q53QZ3 475 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 RARS2Q5T160 578 aaKnown RBP11.78□□□□□ -0.52
MSH5-214ENST00000468602 FAM102AQ5T9C2 384 aaPredicted RBP11.78□□□□□ -0.52
MSH5-214ENST00000468602 BTBD8Q5XKL5 378 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 TRNP1Q6NT89 227 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 DNAJC24Q6P3W2 148 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 HFE2Q6ZVN8 426 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 C12orf76Q8N812 135 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms