RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, human

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-208	ENST00000468600	MAML1	Q92585	1016 aa		4.11	□□□□□ -1.75
SSB-208	ENST00000468600	SPSB4	Q96A44	273 aa		4.11	□□□□□ -1.75
SSB-208	ENST00000468600	WDYHV1	Q96HA8	205 aa		4.11	□□□□□ -1.75
SSB-208	ENST00000468600	KAZALD1	Q96I82	304 aa		4.11	□□□□□ -1.75
SSB-208	ENST00000468600	TAAR9	Q96RI9	348 aa		4.11	□□□□□ -1.75
SSB-208	ENST00000468600	ACO2	Q99798	780 aa	Known RBP	4.11	□□□□□ -1.75
SSB-208	ENST00000468600	ZPBP	Q9BS86	351 aa		4.11	□□□□□ -1.75
SSB-208	ENST00000468600	DHX36	Q9H2U1	1008 aa	Known RBP	4.11	□□□□□ -1.75
SSB-208	ENST00000468600	ATP6V0A4	Q9HBG4	840 aa		4.11	□□□□□ -1.75
SSB-208	ENST00000468600	TYW1	Q9NV66	732 aa	Known RBP	4.11	□□□□□ -1.75
SSB-208	ENST00000468600	LPAR3	Q9UBY5	353 aa		4.11	□□□□□ -1.75
SSB-208	ENST00000468600	LOC102723971	A0A1B0GUV8	181 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600	SERINC4	A6NH21	518 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600		A8MVJ9	347 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600	CT47B1	P0C2W7	299 aa	Predicted RBP	4.1	□□□□□ -1.75
SSB-208	ENST00000468600	KIT	P10721	976 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600	MTHFS	P49914	203 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600	PIN1	Q13526	163 aa	Predicted RBP	4.1	□□□□□ -1.75
SSB-208	ENST00000468600	FHL3	Q13643	280 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600	AWAT1	Q58HT5	328 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600	ZDHHC24	Q6UX98	284 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600	PELI3	Q8N2H9	469 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600	C12orf76	Q8N812	135 aa	Predicted RBP	4.1	□□□□□ -1.75
SSB-208	ENST00000468600	OR56A3	Q8NH54	315 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600	EDC3	Q96F86	508 aa	Known RBP	4.1	□□□□□ -1.75
SSB-208	ENST00000468600	HIC2	Q96JB3	615 aa		4.1	□□□□□ -1.75
SSB-208	ENST00000468600	TRIM43B	A6NCK2	446 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	TBX3	O15119	743 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	FRS3	O43559	492 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	SRGAP2	O75044	1071 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	RFPL1	O75677	317 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	ALDH1L1	O75891	902 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	TUSC2	O75896	110 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	CD19	P15391	556 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	MCL1	Q07820	350 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	PTPRO	Q16827	1216 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	ZNF750	Q32MQ0	723 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	NPNT	Q6UXI9	565 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	GSG1L	Q6UXU4	331 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	MAEA	Q7L5Y9	396 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.09	□□□□□ -1.75
SSB-208	ENST00000468600	PNPLA1	Q8N8W4	532 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	NGDN	Q8NEJ9	315 aa	Known RBP	4.09	□□□□□ -1.75
SSB-208	ENST00000468600	PPP1R35	Q8TAP8	253 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.09	□□□□□ -1.75
SSB-208	ENST00000468600	NMD3	Q96D46	503 aa	Known RBP	4.09	□□□□□ -1.75
SSB-208	ENST00000468600	HS6ST2	Q96MM7	605 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	TMEM204	Q9BSN7	226 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	MLXIP	Q9HAP2	919 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	SEMA5B	Q9P283	1151 aa		4.09	□□□□□ -1.75
SSB-208	ENST00000468600	ISM1	B1AKI9	464 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	PYCARD-AS1	I3L0S3	204 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	CLIC1	O00299	241 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	RRP9	O43818	475 aa	Known RBP	4.08	□□□□□ -1.76
SSB-208	ENST00000468600	MARCH6	O60337	910 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	RASAL1	O95294	804 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	KLRC1	P26715	233 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	CDC25A	P30304	524 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	GATM	P50440	423 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	ZXDB	P98169	803 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	SLC9C1	Q4G0N8	1177 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.08	□□□□□ -1.76
SSB-208	ENST00000468600	WIPF2	Q8TF74	440 aa	Predicted RBP	4.08	□□□□□ -1.76
SSB-208	ENST00000468600	JPH3	Q8WXH2	748 aa	Predicted RBP	4.08	□□□□□ -1.76
SSB-208	ENST00000468600	ZNF668	Q96K58	619 aa	Predicted RBP	4.08	□□□□□ -1.76
SSB-208	ENST00000468600	TMEM60	Q9H2L4	133 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	FAM83D	Q9H4H8	585 aa		4.08	□□□□□ -1.76
SSB-208	ENST00000468600	MRPL44	Q9H9J2	332 aa	Known RBP	4.08	□□□□□ -1.76
SSB-208	ENST00000468600	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.08	□□□□□ -1.76
SSB-208	ENST00000468600	NOP58	Q9Y2X3	529 aa	Known RBP	4.08	□□□□□ -1.76
SSB-208	ENST00000468600	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.08	□□□□□ -1.76
SSB-208	ENST00000468600	SPATA31A1	Q5TZJ5	1347 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	EXOC5	O00471	708 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	RGS10	O43665	173 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	PARP1	P09874	1014 aa	Known RBP	4.07	□□□□□ -1.76
SSB-208	ENST00000468600	SLC7A1	P30825	629 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	MCM5	P33992	734 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	PGD	P52209	483 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	ARHGEF7	Q14155	803 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	MFSD13A	Q14CX5	517 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	TTF1	Q15361	905 aa	Predicted RBP	4.07	□□□□□ -1.76
SSB-208	ENST00000468600	ASIC2	Q16515	512 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	ST3GAL2	Q16842	350 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	DGKK	Q5KSL6	1271 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	CACHD1	Q5VU97	1274 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	OVCH2	Q7RTZ1	564 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	KCTD20	Q7Z5Y7	419 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	KIAA0319L	Q8IZA0	1049 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	MMP21	Q8N119	569 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	BCAS4	Q8TDM0	211 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	ZBTB45	Q96K62	511 aa	Predicted RBP	4.07	□□□□□ -1.76
SSB-208	ENST00000468600	B3GNT5	Q9BYG0	378 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	C22orf23	Q9BZE7	217 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	STK32B	Q9NY57	414 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	ZNF180	Q9UJW8	692 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	FZD4	Q9ULV1	537 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	EVPL	Q92817	2033 aa		4.07	□□□□□ -1.76
SSB-208	ENST00000468600	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.06	□□□□□ -1.76
SSB-208	ENST00000468600	CAPN8	A6NHC0	703 aa		4.06	□□□□□ -1.76
SSB-208	ENST00000468600		H7C4K7	107 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms