RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 TRIM16O95361 564 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 CD59P13987 128 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 NDUFV2P19404 249 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 NASPP49321 788 aaPredicted RBP13.85□□□□□ -0.19
PTPN7-207ENST00000468385 CASP4P49662 377 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 SNRPFP62306 86 aaKnown RBP13.85□□□□□ -0.19
PTPN7-207ENST00000468385 ASIC1P78348 528 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 RING1Q06587 406 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 EHHADHQ08426 723 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 GRAMD4Q6IC98 578 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 NUDT18Q6ZVK8 323 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 RABEPKQ7Z6M1 372 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 FUKQ8N0W3 1084 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 PLEKHO2Q8TD55 490 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 IPO4Q8TEX9 1081 aaKnown RBP13.85□□□□□ -0.19
PTPN7-207ENST00000468385 SMARCD1Q96GM5 515 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 SDCBP2Q9H190 292 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 CUEDC2Q9H467 287 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 UPF2Q9HAU5 1272 aaKnown RBP13.85□□□□□ -0.19
PTPN7-207ENST00000468385 CYP8B1Q9UNU6 501 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 CEP192Q8TEP8 1941 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 ATP8B3O60423 1300 aa13.85□□□□□ -0.19
PTPN7-207ENST00000468385 CACNA1EQ15878 2313 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 PRRT4C9JH25 899 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 TAF4O00268 1085 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 CACNG3O60359 315 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 TLR5O60602 858 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 ZNF217O75362 1048 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 AP1G2O75843 785 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 BEST1O76090 585 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 CAPNS1P04632 268 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 AMPD3Q01432 767 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 LRSAM1Q6UWE0 723 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 HTR3DQ70Z44 454 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 C12orf56Q8IXR9 622 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 CHPFQ8IZ52 775 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 CHCHD4Q8N4Q1 142 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 TRIML1Q8N9V2 468 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 LINC00301Q8NCQ3 95 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 ELMO3Q96BJ8 720 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 DHX58Q96C10 678 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 ERLEC1Q96DZ1 483 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 TNIP3Q96KP6 325 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 HSPA12BQ96MM6 686 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 SMOQ99835 787 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 GABRG3Q99928 467 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 C7orf25Q9BPX7 421 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 KLF16Q9BXK1 252 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-207ENST00000468385 CD93Q9NPY3 652 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 KRT82Q9NSB4 513 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 DNAJC17Q9NVM6 304 aaKnown RBP13.84□□□□□ -0.19
PTPN7-207ENST00000468385 DNAAF2Q9NVR5 837 aaKnown RBP13.84□□□□□ -0.19
PTPN7-207ENST00000468385 MARK1Q9P0L2 795 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 DMXL2Q8TDJ6 3036 aa13.84□□□□□ -0.19
PTPN7-207ENST00000468385 A0A1W2PQD8 194 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 NEDD8-MDP1E9PL57 170 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 PHACTR2O75167 634 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 GJB3O75712 270 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 TBX18O95935 607 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 C4BPAP04003 597 aaKnown RBP13.83□□□□□ -0.2
PTPN7-207ENST00000468385 CCDC130P13994 396 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 TYRP14679 529 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 STK38Q15208 465 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 BMT2Q1RMZ1 405 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 ZNF699Q32M78 642 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 ZNF667Q5HYK9 610 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 SCARA5Q6ZMJ2 495 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 TOGARAM2Q6ZUX3 1019 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 UNC13DQ70J99 1090 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 RAB44Q7Z6P3 723 aaPredicted RBP13.83□□□□□ -0.2
PTPN7-207ENST00000468385 ACOT1Q86TX2 421 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 ZNF419Q96HQ0 510 aaPredicted RBP13.83□□□□□ -0.2
PTPN7-207ENST00000468385 XPO6Q96QU8 1125 aaKnown RBP13.83□□□□□ -0.2
PTPN7-207ENST00000468385 BBS2Q9BXC9 721 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 NACA2Q9H009 215 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 SLC6A17Q9H1V8 727 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.2
PTPN7-207ENST00000468385 CSNK1G1Q9HCP0 422 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 LHX6Q9UPM6 363 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 RAD54BQ9Y620 910 aa13.83□□□□□ -0.2
PTPN7-207ENST00000468385 LRRIQ3A6PVS8 624 aaPredicted RBP13.82□□□□□ -0.2
PTPN7-207ENST00000468385 SPTLC2O15270 562 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 PPP6R2O75170 966 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 VNN1O95497 513 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 SYPP08247 313 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 CISD3P0C7P0 127 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 CASP1P29466 404 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 RDXP35241 583 aaKnown RBP13.82□□□□□ -0.2
PTPN7-207ENST00000468385 CLDN10P78369 228 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 ORC1Q13415 861 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 BIRC3Q13489 604 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 NCOA4Q13772 614 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 HNRNPDQ14103 355 aaKnown RBP13.82□□□□□ -0.2
PTPN7-207ENST00000468385 ZNF423Q2M1K9 1284 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 SDE2Q6IQ49 451 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 TPGS1Q6ZTW0 290 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 SLC2A14Q8TDB8 520 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 PARD3BQ8TEW8 1205 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 P2RY11Q96G91 374 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 MRGPRX1Q96LB2 322 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms