RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 RING1Q06587 406 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 GRSF1Q12849 480 aaKnown RBP eCLIP11.66□□□□□ -0.54
PRPF3-203ENST00000467514 CUL2Q13617 745 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 SGSM1Q2NKQ1 1148 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 UAP1L1Q3KQV9 507 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 TDRD12Q587J7 1177 aaKnown RBP11.66□□□□□ -0.54
PRPF3-203ENST00000467514 APPL2Q8NEU8 664 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 SHKBP1Q8TBC3 707 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 KIF12Q96FN5 646 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 ANKRD36BP1Q96IX9 119 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 C16orf45Q96MC5 204 aaPredicted RBP11.66□□□□□ -0.54
PRPF3-203ENST00000467514 ZMAT2Q96NC0 199 aaKnown RBP11.66□□□□□ -0.54
PRPF3-203ENST00000467514 GCNAQ96QF7 691 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 ARID3AQ99856 593 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 SCNM1Q9BWG6 230 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 LACRTQ9GZZ8 138 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 ATXN3LQ9H3M9 355 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.66□□□□□ -0.54
PRPF3-203ENST00000467514 THG1LQ9NWX6 298 aaKnown RBP11.66□□□□□ -0.54
PRPF3-203ENST00000467514 YIPF1Q9Y548 306 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 PCDHA13Q9Y5I0 950 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 PKD1L2Q7Z442 2459 aa11.66□□□□□ -0.54
PRPF3-203ENST00000467514 NCANO14594 1321 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 KIF2AO00139 706 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-203ENST00000467514 ARNTLO00327 626 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 PHACTR2O75167 634 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 CCDC172P0C7W6 258 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 TNNT1P13805 278 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 TBXAS1P24557 533 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-203ENST00000467514 IGFBP6P24592 240 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-203ENST00000467514 ZNF132P52740 706 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 FCHO2Q0JRZ9 810 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 CCINQ13939 588 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 TMEM132DQ14C87 1099 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 SPA17Q15506 151 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 ITPRIPL2Q3MIP1 535 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 PLA2G2CQ5R387 149 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 GPR158Q5T848 1215 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 ARID3BQ8IVW6 561 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-203ENST00000467514 TMEM130Q8N3G9 435 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 PGLYRP2Q96PD5 576 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 HHIPQ96QV1 700 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 TMEM209Q96SK2 561 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 NIF3L1Q9GZT8 377 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 TMEM9BQ9NQ34 198 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 ADAMTS1Q9UHI8 967 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 NAGPAQ9UK23 515 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 ITGA11Q9UKX5 1188 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 TFR2Q9UP52 801 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 CITO14578 2027 aa11.65□□□□□ -0.54
PRPF3-203ENST00000467514 EML5Q05BV3 1969 aa11.65□□□□□ -0.55
PRPF3-203ENST00000467514 CCDC163A0A0D9SF12 145 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 SMIM28A0A1B0GU29 152 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 KHNYNO15037 678 aaKnown RBP11.64□□□□□ -0.55
PRPF3-203ENST00000467514 CYP26A1O43174 497 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 MOSPD3O75425 235 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 ATICP31939 592 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 MAGEA1P43355 309 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 ASPAP45381 313 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 GUCY2FP51841 1108 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 TNK2Q07912 1038 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 TAF12Q16514 161 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 PLK5Q496M5 336 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 C10orf76Q5T2E6 689 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 STXBP5Q5T5C0 1151 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 RNF19BQ6ZMZ0 732 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 NOP9Q86U38 636 aaKnown RBP11.64□□□□□ -0.55
PRPF3-203ENST00000467514 BPIFB1Q8TDL5 484 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 SLC20A1Q8WUM9 679 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 EXOC4Q96A65 974 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 RSPRY1Q96DX4 576 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 AGPAT1Q99943 283 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 DEF6Q9H4E7 631 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 LZTFL1Q9NQ48 299 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 TRIM10Q9UDY6 481 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 MAFFQ9ULX9 164 aa11.64□□□□□ -0.55
PRPF3-203ENST00000467514 ZNF638Q14966 1978 aaKnown RBP11.63□□□□□ -0.55
PRPF3-203ENST00000467514 ANO9A1A5B4 782 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 EIF4E1BA6NMX2 242 aaKnown RBP11.63□□□□□ -0.55
PRPF3-203ENST00000467514 BTNL10A8MVZ5 291 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 RNF40O75150 1001 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 IPO7O95373 1038 aaKnown RBP11.63□□□□□ -0.55
PRPF3-203ENST00000467514 FGF19O95750 216 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 TOP3BO95985 862 aaKnown RBP11.63□□□□□ -0.55
PRPF3-203ENST00000467514 ITGB3P05106 788 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 CEACAM1P13688 526 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 CYP11B1P15538 503 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 CYP3A5P20815 502 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 GABRR2P28476 465 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 RDXP35241 583 aaKnown RBP11.63□□□□□ -0.55
PRPF3-203ENST00000467514 EPHA5P54756 1037 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 RBP5P82980 135 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 AMPD2Q01433 879 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 CDR2Q01850 454 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 YWHAHQ04917 246 aaPredicted RBP11.63□□□□□ -0.55
PRPF3-203ENST00000467514 SOX4Q06945 474 aaPredicted RBP11.63□□□□□ -0.55
PRPF3-203ENST00000467514 TRPC3Q13507 836 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 ZNF699Q32M78 642 aa11.63□□□□□ -0.55
PRPF3-203ENST00000467514 PKN3Q6P5Z2 889 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms