RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 POC1B-GALNT4F8VUJ3 575 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 UBE2Q2LH0YL09 131 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 NPHP1O15259 732 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 THAP12O43422 761 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 SPRY2O43597 315 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 TMPRSS11DO60235 418 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 SNX2O60749 519 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 LATS1O95835 1130 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 CHRM5P08912 532 aaPredicted RBP4.45□□□□□ -1.7
VPS50-209ENST00000467326 CD19P15391 556 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 PHKG2P15735 406 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 CREB1P16220 341 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 TSHRP16473 764 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 BTF3P20290 206 aaKnown RBP4.45□□□□□ -1.7
VPS50-209ENST00000467326 MCCP23508 829 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 CERS1P27544 350 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 NTSR1P30989 418 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 PIK3CBP42338 1070 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 DIO1P49895 249 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 ALDH5A1P51649 535 aaPredicted RBP4.45□□□□□ -1.7
VPS50-209ENST00000467326 KRTAP10-11P60412 298 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 POU5F1BQ06416 359 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 ZNF543Q08ER8 600 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 LMAN2Q12907 356 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 SRSF7Q16629 238 aaKnown RBP eCLIP4.45□□□□□ -1.7
VPS50-209ENST00000467326 COBLL1Q53SF7 1204 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 BHLHA9Q7RTU4 235 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 GALNT4Q8N4A0 578 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 FYTTD1Q96QD9 318 aaKnown RBP4.45□□□□□ -1.7
VPS50-209ENST00000467326 HIST1H2AAQ96QV6 131 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 TMX4Q9H1E5 349 aaPredicted RBP4.45□□□□□ -1.7
VPS50-209ENST00000467326 ASIC5Q9NY37 505 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 STEAP1Q9UHE8 339 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 VPS51Q9UID3 782 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 CLCA1A8K7I4 914 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 A8MVJ9 347 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 IFRD1O00458 451 aaPredicted RBP4.44□□□□□ -1.7
VPS50-209ENST00000467326 PMM2O15305 246 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 GCATO75600 419 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 CYP2D6P10635 497 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 APEHP13798 732 aaKnown RBP4.44□□□□□ -1.7
VPS50-209ENST00000467326 SLC5A1P13866 664 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 TRIM27P14373 513 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 ITGB6P18564 788 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 CD53P19397 219 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 MAN1A1P33908 653 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 IFIT5Q13325 482 aaKnown RBP4.44□□□□□ -1.7
VPS50-209ENST00000467326 SAFBQ15424 915 aaKnown RBP eCLIP4.44□□□□□ -1.7
VPS50-209ENST00000467326 ST3GAL2Q16842 350 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 FAM187BQ17R55 369 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 MANEALQ5VSG8 457 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 KLHDC7AQ5VTJ3 777 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 RRAGBQ5VZM2 374 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 USP49Q70CQ1 688 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 METTL25Q8N6Q8 603 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 NGDNQ8NEJ9 315 aaKnown RBP4.44□□□□□ -1.7
VPS50-209ENST00000467326 CTHRC1Q96CG8 243 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 ZDHHC12Q96GR4 267 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 ZC3H10Q96K80 434 aaKnown RBP4.44□□□□□ -1.7
VPS50-209ENST00000467326 SLC25A32Q9H2D1 315 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 CAPN11Q9UMQ6 739 aa4.44□□□□□ -1.7
VPS50-209ENST00000467326 DNAJC9-AS1A6NH13 148 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 APAF1O14727 1248 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 ADAMTS3O15072 1205 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 PRR35P0CG20 571 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 MPGP29372 298 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 MCM5P33992 734 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 PRIM2P49643 509 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 CASP5P51878 434 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 COPB1P53618 953 aaKnown RBP4.43□□□□□ -1.7
VPS50-209ENST00000467326 KRTAP10-9P60411 292 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 LMOD3Q0VAK6 560 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 CLCA4Q14CN2 919 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 CEP78Q5JTW2 689 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 CATSPERGQ6ZRH7 1159 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 YTHDF3Q7Z739 585 aaKnown RBP4.43□□□□□ -1.7
VPS50-209ENST00000467326 PCGF5Q86SE9 256 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 NEK8Q86SG6 692 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 LINC01465Q8N7H1 131 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 C11orf44Q8N8P7 122 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 MAFAQ8NHW3 353 aaPredicted RBP4.43□□□□□ -1.7
VPS50-209ENST00000467326 MBD3L2Q8NHZ7 208 aaPredicted RBP4.43□□□□□ -1.7
VPS50-209ENST00000467326 LRRC46Q96FV0 321 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 VPS50Q96JG6 964 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 C5orf34Q96MH7 638 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 SELENOOQ9BVL4 669 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 AS3MTQ9HBK9 375 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 NRIP3Q9NQ35 241 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 ZNF70Q9UC06 446 aaPredicted RBP4.43□□□□□ -1.7
VPS50-209ENST00000467326 NKX1-2Q9UD57 310 aaPredicted RBP4.43□□□□□ -1.7
VPS50-209ENST00000467326 SLC27A6Q9Y2P4 619 aa4.43□□□□□ -1.7
VPS50-209ENST00000467326 A0A087WZ62 844 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 A0A1W2PPC4 97 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 TCRBV5S1A1TA0A578 114 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 BTBD19C9JJ37 291 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 TMEM232C9JQI7 657 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 CCER2I3L3R5 266 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 PPP6CO00743 305 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 TUBB4AP04350 444 aa4.42□□□□□ -1.7
VPS50-209ENST00000467326 CYP2A6P11509 494 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms