RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 CCDC33Q8N5R6 958 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 MAFAQ8NHW3 353 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-203ENST00000466732 LRRC46Q96FV0 321 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 ZNF778Q96MU6 729 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 TBCBQ99426 244 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 SLC25A32Q9H2D1 315 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 NRIP3Q9NQ35 241 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 ZNF70Q9UC06 446 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-203ENST00000466732 COL15A1P39059 1388 aa4.64□□□□□ -1.67
VPS13D-203ENST00000466732 SMIM35A0A1B0GVV1 85 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 CLCA1A8K7I4 914 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 TMEM232C9JQI7 657 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 H3BNC9 293 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 AREL1O15033 823 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 PMM2O15305 246 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 FGFR2P21802 821 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 ADRA1DP25100 572 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 ATICP31939 592 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 STT3AP46977 705 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 ZNF81P51508 661 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 CFHR3Q02985 330 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 HLTFQ14527 1009 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS13D-203ENST00000466732 LARS2Q15031 903 aaKnown RBP4.63□□□□□ -1.67
VPS13D-203ENST00000466732 C4orf46Q504U0 113 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 AWAT1Q58HT5 328 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 MIS18BP1Q6P0N0 1132 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 TMEM65Q6PI78 240 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 C1QL2Q7Z5L3 287 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 FSTL5Q8N475 847 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-203ENST00000466732 C12orf76Q8N812 135 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-203ENST00000466732 NGDNQ8NEJ9 315 aaKnown RBP4.63□□□□□ -1.67
VPS13D-203ENST00000466732 PJA1Q8NG27 643 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 MBD3L2Q8NHZ7 208 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-203ENST00000466732 COLEC11Q9BWP8 271 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 C1QTNF7Q9BXJ2 289 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 NAA15Q9BXJ9 866 aaKnown RBP4.63□□□□□ -1.67
VPS13D-203ENST00000466732 GJB4Q9NTQ9 266 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 GEMIN8Q9NWZ8 242 aaKnown RBP4.63□□□□□ -1.67
VPS13D-203ENST00000466732 GAR1Q9NY12 217 aaKnown RBP4.63□□□□□ -1.67
VPS13D-203ENST00000466732 MYO1AQ9UBC5 1043 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 RNF7Q9UBF6 113 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 WDR17Q8IZU2 1322 aa4.63□□□□□ -1.67
VPS13D-203ENST00000466732 A0A1W2PPC4 97 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 APOL1O14791 398 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 WDR47O94967 919 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 TMEM225BP0DP42 221 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 ATF7P17544 494 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-203ENST00000466732 SFPQP23246 707 aaKnown RBP eCLIP4.62□□□□□ -1.67
VPS13D-203ENST00000466732 YY1P25490 414 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 GNALP38405 381 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 ARHGAP25P42331 645 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 MTAPQ13126 283 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 IFIT5Q13325 482 aaKnown RBP4.62□□□□□ -1.67
VPS13D-203ENST00000466732 TMEM63BQ5T3F8 832 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 MORN5Q5VZ52 161 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 SLC2A7Q6PXP3 512 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 CRTC1Q6UUV9 634 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 ZNF813Q6ZN06 617 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 DCDC5Q6ZRR9 648 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 PNPLA1Q8N8W4 532 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 SUN3Q8TAQ9 357 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 PNISRQ8TF01 805 aaKnown RBP4.62□□□□□ -1.67
VPS13D-203ENST00000466732 SMG7Q92540 1137 aaKnown RBP4.62□□□□□ -1.67
VPS13D-203ENST00000466732 EDC3Q96F86 508 aaKnown RBP4.62□□□□□ -1.67
VPS13D-203ENST00000466732 VPS50Q96JG6 964 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 ZC3H10Q96K80 434 aaKnown RBP4.62□□□□□ -1.67
VPS13D-203ENST00000466732 HS6ST2Q96MM7 605 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 EFHD1Q9BUP0 239 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 KLHL13Q9P2N7 655 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 BTBD3Q9Y2F9 522 aa4.62□□□□□ -1.67
VPS13D-203ENST00000466732 CYP2D7A0A087X1C5 515 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 KCNQ3O43525 872 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 CA12O43570 354 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 BCAR3O75815 825 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 MYL3P08590 195 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 MYL4P12829 197 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 GPC5P78333 572 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 KLF9Q13886 244 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-203ENST00000466732 KCNB1Q14721 858 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 MFSD13AQ14CX5 517 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 DAZAP2Q15038 168 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-203ENST00000466732 GRHL2Q6ISB3 625 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 KSR2Q6VAB6 950 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 BEND5Q7L4P6 421 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 ZNF398Q8TD17 642 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 KAZALD1Q96I82 304 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 CCDC136Q96JN2 1154 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 MAGEB5Q9BZ81 275 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 PRSS22Q9GZN4 317 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 USP29Q9HBJ7 922 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 ZBTB26Q9HCK0 441 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 STARD7Q9NQZ5 370 aa4.61□□□□□ -1.67
VPS13D-203ENST00000466732 SCAF8Q9UPN6 1271 aaKnown RBP4.61□□□□□ -1.67
VPS13D-203ENST00000466732 ANO9A1A5B4 782 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 KCNU1A8MYU2 1149 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 CLIC1O00299 241 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 PRAMEF2O60811 474 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 COQ9O75208 318 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 ARP10275 920 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms