RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CCDC170Q8IYT3 715 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 MCOLN2Q8IZK6 566 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 CMTM8Q8IZV2 173 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 PLCD3Q8N3E9 789 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 TDRD5Q8NAT2 981 aaKnown RBP16.77■□□□□ 0.28
GPC1-207ENST00000466624 TRIM11Q96F44 468 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 SLC46A2Q9BY10 475 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 TRPV4Q9HBA0 871 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 OLA1Q9NTK5 396 aaKnown RBP16.77■□□□□ 0.28
GPC1-207ENST00000466624 OSER1Q9NX31 292 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 TAS2R14Q9NYV8 317 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 TRAV19A0A0A6YYK7 116 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 C2orf78A6NCI8 922 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 AKR1B10O60218 316 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 TLR5O60602 858 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 HSF2BPO75031 334 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 ABL1P00519 1130 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 MYBL1P10243 752 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 RARGP13631 454 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 PGFP49763 221 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 YWHAZP63104 245 aaKnown RBP16.76■□□□□ 0.27
GPC1-207ENST00000466624 SLC7A9P82251 487 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 POTEHQ6S545 545 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 ADHFE1Q8IWW8 467 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 ZDHHC14Q8IZN3 488 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 MAB21L3Q8N8X9 362 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 C3orf20Q8ND61 904 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 NDRG1Q92597 394 aaKnown RBP16.76■□□□□ 0.27
GPC1-207ENST00000466624 PDLIM2Q96JY6 352 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 ASB16Q96NS5 453 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 SLITRK6Q9H5Y7 841 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 POPDC2Q9HBU9 364 aa16.76■□□□□ 0.27
GPC1-207ENST00000466624 KIF26AQ9ULI4 1882 aaPredicted RBP16.76■□□□□ 0.27
GPC1-207ENST00000466624 C2CD4DB7Z1M9 353 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 LOC730098B7Z3J9 87 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 COCHO43405 550 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 FTLP02792 175 aaPredicted RBP16.75■□□□□ 0.27
GPC1-207ENST00000466624 BMP1P13497 986 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 TCF3P15923 654 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 HDCP19113 662 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 ATP5C1P36542 298 aaKnown RBP16.75■□□□□ 0.27
GPC1-207ENST00000466624 AVPR1AP37288 418 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 GFPT1Q06210 699 aaPredicted RBP16.75■□□□□ 0.27
GPC1-207ENST00000466624 CCDC122Q5T0U0 273 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 MSANTD2Q6P1R3 559 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 HFE2Q6ZVN8 426 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 MTSS1LQ765P7 747 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 TMEM139Q8IV31 216 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 ZSCAN18Q8TBC5 510 aaPredicted RBP16.75■□□□□ 0.27
GPC1-207ENST00000466624 SMARCD2Q92925 531 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 KHSRPQ92945 711 aaKnown RBP eCLIP16.75■□□□□ 0.27
GPC1-207ENST00000466624 E2F7Q96AV8 911 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 FAM149B1Q96BN6 582 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 PIWIL1Q96J94 861 aaKnown RBP16.75■□□□□ 0.27
GPC1-207ENST00000466624 ZSWIM3Q96MP5 696 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 SLC2A13Q96QE2 648 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 BAG1Q99933 345 aaPredicted RBP16.75■□□□□ 0.27
GPC1-207ENST00000466624 CCSER2Q9H7U1 834 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 KIF9Q9HAQ2 790 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 TRPC7Q9HCX4 862 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 OBP2AQ9NY56 170 aa16.75■□□□□ 0.27
GPC1-207ENST00000466624 C5orf42Q9H799 3197 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 TCRBV5S1A1TA0A578 114 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 TMCO5BA8MYB1 307 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 DAB1O75553 588 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 LCA5LO95447 670 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 FYNP06241 537 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 CYLC1P35663 651 aaPredicted RBP16.74■□□□□ 0.27
GPC1-207ENST00000466624 C2CD6Q53TS8 623 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 FAM78AQ5JUQ0 283 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 C10orf76Q5T2E6 689 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 FAM102AQ5T9C2 384 aaPredicted RBP16.74■□□□□ 0.27
GPC1-207ENST00000466624 ARL14EPQ8N8R7 260 aaPredicted RBP16.74■□□□□ 0.27
GPC1-207ENST00000466624 RNF139Q8WU17 664 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 NXPE3Q969Y0 559 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 SLC22A12Q96S37 553 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 RNF38Q9H0F5 515 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 RRN3Q9NYV6 651 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 TMEM59LQ9UK28 342 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 ARHGAP26Q9UNA1 814 aa16.74■□□□□ 0.27
GPC1-207ENST00000466624 TCF20Q9UGU0 1960 aaKnown RBP16.74■□□□□ 0.27
GPC1-207ENST00000466624 ANKRD62A6NC57 917 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 ANHXE9PGG2 379 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 CAPN9O14815 690 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 CKMP06732 381 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 NCAM1P13591 858 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 RRM1P23921 792 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 FCARP24071 287 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 ZP2Q05996 745 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 TAF5Q15542 800 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 C10orf120Q5SQS8 335 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 PLEKHA7Q6IQ23 1121 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 RSRC2Q7L4I2 434 aaKnown RBP16.73■□□□□ 0.27
GPC1-207ENST00000466624 DDX42Q86XP3 938 aaKnown RBP eCLIP16.73■□□□□ 0.27
GPC1-207ENST00000466624 ARID3BQ8IVW6 561 aaPredicted RBP16.73■□□□□ 0.27
GPC1-207ENST00000466624 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.73■□□□□ 0.27
GPC1-207ENST00000466624 KIAA1958Q8N8K9 716 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 CCDC112Q8NEF3 446 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 RPGRIP1Q96KN7 1286 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 CYP2S1Q96SQ9 504 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms