RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 DDX1Q92499 740 aaKnown RBP9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 CLDN23Q96B33 292 aa9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 CHFRQ96EP1 664 aa9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 ZFYVE19Q96K21 471 aa9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 NELL2Q99435 816 aa9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 LRRC4Q9HBW1 653 aa9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 HEBP1Q9NRV9 189 aa9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 CYTH4Q9UIA0 394 aa9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 DNMT3LQ9UJW3 386 aa9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 NAGPAQ9UK23 515 aa9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 ARIH1Q9Y4X5 557 aaPredicted RBP9.95□□□□□ -0.82
SDCCAG3-208ENST00000466579 A0A1W2PQC6 194 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 OTOL1A6NHN0 477 aaPredicted RBP9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 YJEFN3A6XGL0 299 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 E7ENQ6 273 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 SLC9A3R1O14745 358 aaPredicted RBP9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 TEX33O43247 280 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 TBX18O95935 607 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 PNMA6AP0CW24 399 aaPredicted RBP9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 RALAP11233 206 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 CYP11B1P15538 503 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 CTHP32929 405 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 USP8P40818 1118 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 MAGEA9P43362 315 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 TNK2Q07912 1038 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 PDCLQ13371 301 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 RAPGEF1Q13905 1077 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 NR1I3Q14994 352 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 CC2D1AQ6P1N0 951 aaPredicted RBP9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 MSANTD2Q6P1R3 559 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 ZNF852Q6ZMS4 543 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 TPRG1Q6ZUI0 275 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 HTR3DQ70Z44 454 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 LUZP1Q86V48 1076 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 ZNF677Q86XU0 584 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 SUGP1Q8IWZ8 645 aaKnown RBP9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 CCDC105Q8IYK2 499 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 SIX6OS1Q8N1H7 587 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 CSGALNACT1Q8TDX6 532 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 ATP2A3Q93084 1043 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 OTUB2Q96DC9 234 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 MFSD1Q9H3U5 465 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 LTB4R2Q9NPC1 389 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 FAM207AQ9NSI2 230 aaPredicted RBP9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 DUS2Q9NX74 493 aaKnown RBP9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 GTSE1Q9NYZ3 720 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 CFAP97Q9P2B7 532 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 TBC1D14Q9P2M4 693 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 NOCTQ9UK39 431 aaKnown RBP9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 PIAS3Q9Y6X2 628 aa9.94□□□□□ -0.82
SDCCAG3-208ENST00000466579 WDFY4Q6ZS81 3184 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 SPECC1L-ADORA2AF8WAN1 911 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 PAPSS1O43252 624 aaPredicted RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 SART1O43290 800 aaKnown RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 PI15O43692 258 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 LSM8O95777 96 aaKnown RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 FYNP06241 537 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 ARSAP15289 507 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 TARSP26639 723 aaKnown RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 SOX5P35711 763 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 PBX1P40424 430 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 RPS9P46781 194 aaKnown RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 IFNAR2P48551 515 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 RGS7P49802 495 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 POLR2FP61218 127 aaKnown RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 GAB4Q2WGN9 574 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 FILIP1LQ4L180 1135 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 C10orf120Q5SQS8 335 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 BSPRYQ5W0U4 402 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 TRIM68Q6AZZ1 485 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 LRSAM1Q6UWE0 723 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 Q6ZNB5 142 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 NOP9Q86U38 636 aaKnown RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 ADGRG2Q8IZP9 1017 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 CPA6Q8N4T0 437 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 FLCNQ8NFG4 579 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 NEK11Q8NG66 645 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 EPS8L1Q8TE68 723 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 FAM3CQ92520 227 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 NDRG1Q92597 394 aaKnown RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 WBP2Q969T9 261 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 NAP1L5Q96NT1 182 aaPredicted RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 PRRX2Q99811 253 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 FOXQ1Q9C009 403 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 LINC00597Q9H2U6 94 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 EBF3Q9H4W6 596 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 ECT2Q9H8V3 914 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 ABCC13Q9NSE7 274 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 OLA1Q9NTK5 396 aaKnown RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 SMPD4Q9NXE4 827 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 MYO6Q9UM54 1294 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 MRPS17Q9Y2R5 130 aaKnown RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 SIT1Q9Y3P8 196 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 MTF2Q9Y483 593 aaPredicted RBP9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 WNT6Q9Y6F9 365 aa9.93□□□□□ -0.82
SDCCAG3-208ENST00000466579 MYOFQ9NZM1 2061 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 KIAA1549LQ6ZVL6 1849 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 FAM170BA6NMN3 283 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 E5RJQ4 531 aa9.92□□□□□ -0.82
SDCCAG3-208ENST00000466579 TRDMT1O14717 391 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms