RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 OTUB2Q96DC9 234 aa12.64□□□□□ -0.39
TMCO3-205ENST00000465556 KREMEN1Q96MU8 473 aa12.64□□□□□ -0.39
TMCO3-205ENST00000465556 GBP4Q96PP9 640 aa12.64□□□□□ -0.39
TMCO3-205ENST00000465556 KLF16Q9BXK1 252 aaPredicted RBP12.64□□□□□ -0.39
TMCO3-205ENST00000465556 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
TMCO3-205ENST00000465556 CLIC5Q9NZA1 410 aa12.64□□□□□ -0.39
TMCO3-205ENST00000465556 CEP192Q8TEP8 1941 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 MDM4O15151 490 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 RALAP11233 206 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
TMCO3-205ENST00000465556 EIF2DP41214 584 aaKnown RBP12.63□□□□□ -0.39
TMCO3-205ENST00000465556 PLA2G4AP47712 749 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 TKTL1P51854 596 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 NRLP54845 237 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 GOLGA8FQ08AF8 430 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 GOLGA8DPQ0D2H9 430 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 ADIGQ0VDE8 80 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 PKDCCQ504Y2 493 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 LY6G5CQ5SRR4 150 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 RHBDF2Q6PJF5 856 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 TADA2BQ86TJ2 420 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 C12orf40Q86WS4 652 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 IRF2BP1Q8IU81 584 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 ZNF276Q8N554 614 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 EHBP1Q8NDI1 1231 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 TFAP2BQ92481 460 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 CDK5RAP1Q96SZ6 601 aaKnown RBP12.63□□□□□ -0.39
TMCO3-205ENST00000465556 ULBP1Q9BZM6 244 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 EPC1Q9H2F5 836 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 DNMT3LQ9UJW3 386 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
TMCO3-205ENST00000465556 NUDT5Q9UKK9 219 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 KIAA1257Q9ULG3 409 aa12.63□□□□□ -0.39
TMCO3-205ENST00000465556 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.63□□□□□ -0.39
TMCO3-205ENST00000465556 SMG5Q9UPR3 1016 aaKnown RBP12.63□□□□□ -0.39
TMCO3-205ENST00000465556 THADAQ6YHU6 1953 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 CHURC1-FNTBB4DL54 471 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 M0QYV0 167 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 RNF225M0QZC1 329 aaPredicted RBP12.62□□□□□ -0.39
TMCO3-205ENST00000465556 HOXC11O43248 304 aaPredicted RBP12.62□□□□□ -0.39
TMCO3-205ENST00000465556 GREM1O60565 184 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 ZBED1O96006 694 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 MTIF2P46199 727 aaKnown RBP12.62□□□□□ -0.39
TMCO3-205ENST00000465556 DMWDQ09019 674 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 STILQ15468 1287 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 TPD52L1Q16890 204 aaPredicted RBP12.62□□□□□ -0.39
TMCO3-205ENST00000465556 TRIM65Q6PJ69 517 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 LCLAT1Q6UWP7 414 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 BHLHA9Q7RTU4 235 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 MIB1Q86YT6 1006 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 ADGRG2Q8IZP9 1017 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 ARHGAP18Q8N392 663 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 SUMF1Q8NBK3 374 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 RPLP0P6Q8NHW5 317 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 UBA3Q8TBC4 463 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 ACDQ96AP0 544 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 ZSWIM1Q9BR11 485 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 CRACR2AQ9BSW2 395 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 THAP9Q9H5L6 903 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 LRRC4Q9HBW1 653 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 DACH1Q9UI36 760 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 RASAL2Q9UJF2 1139 aa12.62□□□□□ -0.39
TMCO3-205ENST00000465556 ABCA7Q8IZY2 2146 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 CKAP5Q14008 2032 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 TNRC6BQ9UPQ9 1833 aaKnown RBP12.61□□□□□ -0.39
TMCO3-205ENST00000465556 GTPBP10A4D1E9 387 aaKnown RBP12.61□□□□□ -0.39
TMCO3-205ENST00000465556 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.61□□□□□ -0.39
TMCO3-205ENST00000465556 ATG13O75143 517 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 STC2O76061 302 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 CALCAP01258 141 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 KRT5P13647 590 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 ERCC5P28715 1186 aaPredicted RBP12.61□□□□□ -0.39
TMCO3-205ENST00000465556 HOXA6P31267 233 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 HOXC13P31276 330 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 FNTBP49356 437 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 YWHAGP61981 247 aaKnown RBP eCLIP12.61□□□□□ -0.393e-7■■■■■ 29.6
TMCO3-205ENST00000465556 GAD2Q05329 585 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 KDSRQ06136 332 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 MESP2Q0VG99 397 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 MAN2A1Q16706 1144 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 HEATR6Q6AI08 1181 aaKnown RBP12.61□□□□□ -0.39
TMCO3-205ENST00000465556 PM20D1Q6GTS8 502 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 GBP6Q6ZN66 633 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 Q6ZNB5 142 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 HTR3DQ70Z44 454 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 CREBRFQ8IUR6 639 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 FAM114A1Q8IWE2 563 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 ETFBKMTQ8IXQ9 262 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 SIX6OS1Q8N1H7 587 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 GPT2Q8TD30 523 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 KCTD13Q8WZ19 329 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 IPO9Q96P70 1041 aaKnown RBP12.61□□□□□ -0.39
TMCO3-205ENST00000465556 SPHK2Q9NRA0 654 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 CNTN6Q9UQ52 1028 aa12.61□□□□□ -0.39
TMCO3-205ENST00000465556 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
TMCO3-205ENST00000465556 APODP05090 189 aa12.6□□□□□ -0.39
TMCO3-205ENST00000465556 CHRM1P11229 460 aaPredicted RBP12.6□□□□□ -0.39
TMCO3-205ENST00000465556 SLC6A11P48066 632 aa12.6□□□□□ -0.39
TMCO3-205ENST00000465556 EFEMP1Q12805 493 aa12.6□□□□□ -0.39
TMCO3-205ENST00000465556 CNGA2Q16280 664 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms