RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 PACSIN2Q9UNF0 486 aaPredicted RBP18.02■□□□□ 0.47
PTPRU-206ENST00000465525 SZT2Q5T011 3432 aa18.02■□□□□ 0.47
PTPRU-206ENST00000465525 SPDYE4A6NLX3 237 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 FANCGO15287 622 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 SART1O43290 800 aaKnown RBP18.01■□□□□ 0.47
PTPRU-206ENST00000465525 ZNF500O60304 480 aaPredicted RBP18.01■□□□□ 0.47
PTPRU-206ENST00000465525 ZMYND10O75800 440 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 CSH1P0DML2 217 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 CSH2P0DML3 217 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 SRGAP2BP0DMP2 458 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 NCAM1P13591 858 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 TNNT1P13805 278 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 CCDC14Q49A88 953 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 SYT10Q6XYQ8 523 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 HS6ST3Q8IZP7 471 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 SCML4Q8N228 414 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 ADAM32Q8TC27 787 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 GUCD1Q96NT3 240 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 ALS2CR12Q96Q35 445 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 TTLL2Q9BWV7 592 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 ADAM33Q9BZ11 813 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 POPDC2Q9HBU9 364 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 HCFC1R1Q9NWW0 138 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 MTMR10Q9NXD2 777 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.01■□□□□ 0.47
PTPRU-206ENST00000465525 IP6K2Q9UHH9 426 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 DNAI1Q9UI46 699 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 ANAPC1Q9H1A4 1944 aa18.01■□□□□ 0.47
PTPRU-206ENST00000465525 PRRC2BQ5JSZ5 2229 aaKnown RBP18.01■□□□□ 0.47
PTPRU-206ENST00000465525 CAPN9O14815 690 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 PROSCO94903 275 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 COMTP21964 271 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 DNA2P51530 1060 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 ADAM15Q13444 863 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 BTBD8Q5XKL5 378 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 C11orf63Q6NUN7 778 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 C12orf76Q8N812 135 aaPredicted RBP18■□□□□ 0.47
PTPRU-206ENST00000465525 TRIM58Q8NG06 486 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 GOLGA1Q92805 767 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 PSMG2Q969U7 264 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 ZNF512Q96ME7 567 aaPredicted RBP18■□□□□ 0.47
PTPRU-206ENST00000465525 SLC2A13Q96QE2 648 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 DZANK1Q9NVP4 752 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 ASNSD1Q9NWL6 643 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 ZDHHC7Q9NXF8 308 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 ALG6Q9Y672 507 aa18■□□□□ 0.47
PTPRU-206ENST00000465525 SYNJ2BP-COX16A0A087WUM0 186 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 FAM92AA1XBS5 289 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 ENC1O14682 589 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 HNRNPA1P09651 372 aaKnown RBP eCLIP17.99■□□□□ 0.47
PTPRU-206ENST00000465525 TCF4P15884 667 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 HOXA9P31269 272 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 SDC4P31431 198 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 MATKP42679 507 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 SSR1P43307 286 aaKnown RBP17.99■□□□□ 0.47
PTPRU-206ENST00000465525 SULT1E1P49888 294 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 ZNF143P52747 638 aaPredicted RBP17.99■□□□□ 0.47
PTPRU-206ENST00000465525 MON1AQ86VX9 555 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 MICALL1Q8N3F8 863 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 ZNF592Q92610 1267 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 SLITRK1Q96PX8 696 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 TBCBQ99426 244 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 COX16Q9P0S2 106 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 CALCOCO1Q9P1Z2 691 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 ASB3Q9Y575 518 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 DENND4CQ5VZ89 1909 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 LINC01565O15544 149 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 GLI1P08151 1106 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 FOSL2P15408 326 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 GJC1P36383 396 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 ETF1P62495 437 aaKnown RBP17.99■□□□□ 0.47
PTPRU-206ENST00000465525 PEX26Q7Z412 305 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 SLFN11Q7Z7L1 901 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 ITIH5Q86UX2 942 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 ARFGAP1Q8N6T3 406 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 CORO1BQ9BR76 489 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 CNPY3Q9BT09 278 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 DDX23Q9BUQ8 820 aaKnown RBP17.99■□□□□ 0.47
PTPRU-206ENST00000465525 COMMD8Q9NX08 183 aa17.99■□□□□ 0.47
PTPRU-206ENST00000465525 REV3LO60673 3130 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 C2orf16Q68DN1 1984 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 NRG2O14511 850 aaPredicted RBP17.98■□□□□ 0.47
PTPRU-206ENST00000465525 DPYSL4O14531 572 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 SPOPO43791 374 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 TADA3O75528 432 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 GLP2RO95838 553 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 NOS2P35228 1153 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 ATXN1P54253 815 aaKnown RBP17.98■□□□□ 0.47
PTPRU-206ENST00000465525 PIGHQ14442 188 aaPredicted RBP17.98■□□□□ 0.47
PTPRU-206ENST00000465525 CTC1Q2NKJ3 1217 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 OTUD1Q5VV17 481 aaPredicted RBP17.98■□□□□ 0.47
PTPRU-206ENST00000465525 NT5DC3Q86UY8 548 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 ELMOD1Q8N336 334 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 FAM172AQ8WUF8 416 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 TRMT2BQ96GJ1 504 aaKnown RBP17.98■□□□□ 0.47
PTPRU-206ENST00000465525 MYRFLQ96LU7 910 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 APOL5Q9BWW9 433 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 CCSER2Q9H7U1 834 aa17.98■□□□□ 0.47
PTPRU-206ENST00000465525 TLR8Q9NR97 1041 aaKnown RBP17.98■□□□□ 0.47
PTPRU-206ENST00000465525 EHD2Q9NZN4 543 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms