RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 NUP93Q8N1F7 819 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 SCML4Q8N228 414 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 SLC35G2Q8TBE7 412 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 ZNF564Q8TBZ8 553 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 ADAMTS19Q8TE59 1207 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 PSMG2Q969U7 264 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 ZNF707Q96C28 371 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 MS4A3Q96HJ5 214 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 LRRC3Q9BY71 257 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 NMUR1Q9HB89 426 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 IL21Q9HBE4 155 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 CNGB3Q9NQW8 809 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 HCFC1R1Q9NWW0 138 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 STRIP2Q9ULQ0 834 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 GUCA1BQ9UMX6 200 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 SCML2Q9UQR0 700 aa9.41□□□□□ -0.9
NUDCD3-204ENST00000464812 A0A1W2PQH9 124 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 TMEM191CA6NGB0 347 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 C2CD4BA6NLJ0 364 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 BUB1BO60566 1050 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 FBXO21O94952 628 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 TCF4P15884 667 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 YWHAQP27348 245 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 ELF1P32519 619 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 RFC1P35251 1148 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 SCNN1AP37088 669 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 CCR2P41597 374 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 EPHB3P54753 998 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 HADHBP55084 474 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 KIF5AQ12840 1032 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 TAF10Q12962 218 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 SMAD2Q15796 467 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 PPM1LQ5SGD2 360 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 SYPL2Q5VXT5 272 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 ANKRD54Q6NXT1 300 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 ZDHHC17Q8IUH5 632 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 RHOT2Q8IXI1 618 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 LRRC57Q8N9N7 239 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 MSANTD4Q8NCY6 345 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 TPCN2Q8NHX9 752 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 FBXO32Q969P5 355 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 TRMT2BQ96GJ1 504 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 SLC2A13Q96QE2 648 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 PARVAQ9NVD7 372 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 CTTNBP2NLQ9P2B4 639 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 WDR35Q9P2L0 1181 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 ANAPC7Q9UJX3 599 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 MAFFQ9ULX9 164 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 MAGED2Q9UNF1 606 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 USP15Q9Y4E8 981 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 HYOU1Q9Y4L1 999 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 SCINQ9Y6U3 715 aa9.4□□□□□ -0.9
NUDCD3-204ENST00000464812 COL4A3Q01955 1670 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 SIGLEC16A6NMB1 481 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 TMEM110-MUSTN1A8MSY1 372 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 DPYSL4O14531 572 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 MDM4O15151 490 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 CCP110O43303 1012 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 ZSCAN12O43309 604 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 KRT86O43790 486 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 HSF2BPO75031 334 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 RTN3O95197 1032 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 C1RP00736 705 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 LTFP02788 710 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 ZDHHC11BP0C7U3 371 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 CSH1P0DML2 217 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 CSH2P0DML3 217 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 KRT3P12035 628 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 HOXA9P31269 272 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 ALDH1A3P47895 512 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 ATXN1P54253 815 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 RNASE9P60153 205 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 YWHAGP61981 247 aaKnown RBP eCLIP9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 NTHL1P78549 312 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 ZP2Q05996 745 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 SLC5A9Q2M3M2 681 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 C15orf59Q2T9L4 293 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 ARHGAP29Q52LW3 1261 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 SH3PXD2AQ5TCZ1 1133 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 CCDC149Q6ZUS6 474 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 GAREM2Q75VX8 874 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 DNAJB7Q7Z6W7 309 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 DEFB106AQ8N104 65 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 ARFGAP1Q8N6T3 406 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 RXFP2Q8WXD0 754 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 IRGQQ8WZA9 623 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 EDEM1Q92611 657 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 FAM149B1Q96BN6 582 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 MYRFLQ96LU7 910 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 CEP295NLQ96MC4 621 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 CFAP57Q96MR6 1250 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 CDCA3Q99618 268 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 SELENOOQ9BVL4 669 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 PLEKHA4Q9H4M7 779 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 LUC7LQ9NQ29 371 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 ASNSD1Q9NWL6 643 aa9.39□□□□□ -0.91
NUDCD3-204ENST00000464812 UVRAGQ9P2Y5 699 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms