RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 RAD9AQ99638 391 aa12.64□□□□□ -0.39
SEC61A1-203ENST00000464451 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
SEC61A1-203ENST00000464451 RNF19AQ9NV58 838 aa12.64□□□□□ -0.39
SEC61A1-203ENST00000464451 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
SEC61A1-203ENST00000464451 SHOC2Q9UQ13 582 aa12.64□□□□□ -0.39
SEC61A1-203ENST00000464451 PCDHA11Q9Y5I1 949 aa12.64□□□□□ -0.39
SEC61A1-203ENST00000464451 ANK1P16157 1881 aa12.64□□□□□ -0.39
SEC61A1-203ENST00000464451 TMEM120BA0PK00 339 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 RNF8O76064 485 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 FSBPO95073 299 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 ZSCAN5DPP0CG00 497 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 RDXP35241 583 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 RAB30Q15771 203 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 SMTNL2Q2TAL5 461 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 TTC31Q49AM3 519 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 KCNT1Q5JUK3 1230 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 RNASEH2BQ5TBB1 312 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 EMC1Q8N766 993 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 ANKS4BQ8N8V4 417 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 KCTD6Q8NC69 237 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 CMASQ8NFW8 434 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 P3H4Q92791 437 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 TMEM121Q9BTD3 319 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 TRIM6Q9C030 488 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 NSRP1Q9H0G5 558 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 NXF3Q9H4D5 531 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 SLC28A3Q9HAS3 691 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 SAYSD1Q9NPB0 183 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 ASNSD1Q9NWL6 643 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 TMEM161AQ9NX61 479 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 NAALADL1Q9UQQ1 740 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 INSL6Q9Y581 213 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 ACTL7BQ9Y614 415 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 CDH23Q9H251 3354 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 TBKBP1A7MCY6 615 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 CST8O60676 142 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 IFNB1P01574 187 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 ETS1P14921 441 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 PECAM1P16284 738 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 AKAP5P24588 427 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 MIPP30301 263 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 AXLP30530 894 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 PCK1P35558 622 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 GRM5P41594 1212 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 ZNF143P52747 638 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 NDST1P52848 882 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 HTRA4P83105 476 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 OTUD4Q01804 1114 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 NR1H3Q13133 447 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 PCBP1Q15365 356 aaKnown RBP eCLIP12.63□□□□□ -0.392e-6■□□□□ 10.2
SEC61A1-203ENST00000464451 STILQ15468 1287 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 CCDC142Q17RM4 750 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 DCAF4L1Q3SXM0 396 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 PPP2R2DQ66LE6 453 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 SLC27A1Q6PCB7 646 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 LCLAT1Q6UWP7 414 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 CENPUQ71F23 418 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 PIGWQ7Z7B1 504 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 TMEM130Q8N3G9 435 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 CCDC197Q8NCU1 140 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 SMG8Q8ND04 991 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 ACTL9Q8TC94 416 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 DYDC1Q8WWB3 177 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 NT5C1AQ9BXI3 368 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 PLEKHA5Q9HAU0 1116 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 CTNNAL1Q9UBT7 734 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 USP18Q9UMW8 372 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 INPP5FQ9Y2H2 1132 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 IPPQ9Y573 584 aa12.63□□□□□ -0.39
SEC61A1-203ENST00000464451 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 ALOX15BO15296 676 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 TRUB2O95900 331 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 AFF1P51825 1210 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 DYNLT1P63172 113 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 BTG3Q14201 252 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 ITIH4Q14624 930 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 CLLU1OSQ5K130 101 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 FAM102AQ5T9C2 384 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 VSTM1Q6UX27 236 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 ZNF598Q86UK7 904 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 LRRC34Q8IZ02 419 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 CNPY3Q9BT09 278 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 PHACTR1Q9C0D0 580 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 TTYH1Q9H313 450 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 ACTR5Q9H9F9 607 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 RSAD1Q9HA92 442 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 EURLQ9NYK6 297 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 KLK14Q9P0G3 267 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 SAMD15Q9P1V8 674 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 DERAQ9Y315 318 aa12.62□□□□□ -0.39
SEC61A1-203ENST00000464451 EXOC1LA0A1B0GW35 172 aa12.61□□□□□ -0.39
SEC61A1-203ENST00000464451 LINC01553A4QN01 128 aa12.61□□□□□ -0.39
SEC61A1-203ENST00000464451 APOC4-APOC2K7ER74 178 aa12.61□□□□□ -0.39
SEC61A1-203ENST00000464451 APOC2P02655 101 aa12.61□□□□□ -0.39
SEC61A1-203ENST00000464451 VIMP08670 466 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-203ENST00000464451 BRAFP15056 766 aa12.61□□□□□ -0.39
SEC61A1-203ENST00000464451 IFNAR2P48551 515 aa12.61□□□□□ -0.39
SEC61A1-203ENST00000464451 AGMOQ6ZNB7 445 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms