RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 FOXQ1Q9C009 403 aa18.58■□□□□ 0.56
VPS52-214ENST00000463486 LHX5Q9H2C1 402 aa18.58■□□□□ 0.56
VPS52-214ENST00000463486 EBF3Q9H4W6 596 aa18.58■□□□□ 0.56
VPS52-214ENST00000463486 CFAP97Q9P2B7 532 aa18.58■□□□□ 0.56
VPS52-214ENST00000463486 WNT6Q9Y6F9 365 aa18.58■□□□□ 0.56
VPS52-214ENST00000463486 PIAS3Q9Y6X2 628 aa18.58■□□□□ 0.56
VPS52-214ENST00000463486 KMT2EQ8IZD2 1858 aa18.58■□□□□ 0.56
VPS52-214ENST00000463486 PIK3R2O00459 728 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 MDM4O15151 490 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 LCP1P13796 627 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 CYP11B1P15538 503 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 ATP5C1P36542 298 aaKnown RBP18.57■□□□□ 0.56
VPS52-214ENST00000463486 RUNX3Q13761 415 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 NR1I3Q14994 352 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 PDGFRLQ15198 375 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 ADGRG2Q8IZP9 1017 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 TTC8Q8TAM2 541 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 CLEC4CQ8WTT0 213 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 MFSD1Q9H3U5 465 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 LTB4R2Q9NPC1 389 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 DUS2Q9NX74 493 aaKnown RBP18.57■□□□□ 0.56
VPS52-214ENST00000463486 TJP2Q9UDY2 1190 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 DAAM1Q9Y4D1 1078 aa18.57■□□□□ 0.56
VPS52-214ENST00000463486 E2F8A0AVK6 867 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 FYNP06241 537 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 BPIFB4P59827 614 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 PDCLQ13371 301 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 GAB4Q2WGN9 574 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 ITPRIPL2Q3MIP1 535 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 BSPRYQ5W0U4 402 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 NOP9Q86U38 636 aaKnown RBP18.56■□□□□ 0.56
VPS52-214ENST00000463486 SCUBE3Q8IX30 993 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 CCDC105Q8IYK2 499 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 ARHGAP18Q8N392 663 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 PJA1Q8NG27 643 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 CSGALNACT1Q8TDX6 532 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 IRGQQ8WZA9 623 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 OSBPL6Q9BZF3 934 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 ECT2Q9H8V3 914 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 NLRC4Q9NPP4 1024 aa18.56■□□□□ 0.56
VPS52-214ENST00000463486 NOCTQ9UK39 431 aaKnown RBP18.56■□□□□ 0.56
VPS52-214ENST00000463486 SPECC1L-ADORA2AF8WAN1 911 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 SCAMP3O14828 347 aaKnown RBP18.55■□□□□ 0.56
VPS52-214ENST00000463486 PAPSS1O43252 624 aaPredicted RBP18.55■□□□□ 0.56
VPS52-214ENST00000463486 TARSP26639 723 aaKnown RBP18.55■□□□□ 0.56
VPS52-214ENST00000463486 CTHP32929 405 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 CDH5P33151 784 aaPredicted RBP18.55■□□□□ 0.56
VPS52-214ENST00000463486 C10orf120Q5SQS8 335 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 CC2D1AQ6P1N0 951 aaPredicted RBP18.55■□□□□ 0.56
VPS52-214ENST00000463486 ZNF852Q6ZMS4 543 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 HTR3DQ70Z44 454 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 RALGPS2Q86X27 583 aaPredicted RBP18.55■□□□□ 0.56
VPS52-214ENST00000463486 DDX42Q86XP3 938 aaKnown RBP eCLIP18.55■□□□□ 0.56
VPS52-214ENST00000463486 SUGP1Q8IWZ8 645 aaKnown RBP18.55■□□□□ 0.56
VPS52-214ENST00000463486 SIX6OS1Q8N1H7 587 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 TTC16Q8NEE8 873 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 EPS8L1Q8TE68 723 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 CLDN23Q96B33 292 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 C8orf33Q9H7E9 229 aaPredicted RBP18.55■□□□□ 0.56
VPS52-214ENST00000463486 RAPGEFL1Q9UHV5 662 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 DNMT3LQ9UJW3 386 aa18.55■□□□□ 0.56
VPS52-214ENST00000463486 A0A1W2PQC6 194 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 E5RJQ4 531 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 MAN2B1O00754 1011 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 FBXO21O94952 628 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 KLKB1P03952 638 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 RALAP11233 206 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 CHRNB2P17787 502 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 SOX5P35711 763 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 PBX1P40424 430 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 LRSAM1Q6UWE0 723 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 Q6ZNB5 142 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 PASD1Q8IV76 773 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 MSANTD3Q96H12 275 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 CPXM1Q96SM3 734 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 MIS12Q9H081 205 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 SIT1Q9Y3P8 196 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 DMDP11532 3685 aa18.54■□□□□ 0.56
VPS52-214ENST00000463486 FAM170BA6NMN3 283 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 STC2O76061 302 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 GFPT2O94808 682 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 DCNP07585 359 aaKnown RBP18.53■□□□□ 0.56
VPS52-214ENST00000463486 GJA4P35212 333 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 ACADSBP45954 432 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 IFNAR2P48551 515 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 KPNA1P52294 538 aaPredicted RBP18.53■□□□□ 0.56
VPS52-214ENST00000463486 FANCCQ00597 558 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 EFEMP1Q12805 493 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 NAIF1Q69YI7 327 aaPredicted RBP18.53■□□□□ 0.56
VPS52-214ENST00000463486 RHBDF2Q6PJF5 856 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 BBS7Q8IWZ6 715 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 C1orf131Q8NDD1 294 aaKnown RBP18.53■□□□□ 0.56
VPS52-214ENST00000463486 SLC20A1Q8WUM9 679 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 FAM3CQ92520 227 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 BAP1Q92560 729 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 EDEM1Q92611 657 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 ATP2A3Q93084 1043 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 P2RY11Q96G91 374 aa18.53■□□□□ 0.56
VPS52-214ENST00000463486 PIWIL1Q96J94 861 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms