RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 EBF1Q9UH73 591 aa12.55□□□□□ -0.4
RTCB-202ENST00000463455 USP3Q9Y6I4 520 aa12.55□□□□□ -0.4
RTCB-202ENST00000463455 SPAG17Q6Q759 2223 aa12.55□□□□□ -0.4
RTCB-202ENST00000463455 KIAA1549LQ6ZVL6 1849 aa12.55□□□□□ -0.4
RTCB-202ENST00000463455 BICDL2A1A5D9 508 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 APBB3O95704 486 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 HOXB1P14653 301 aaPredicted RBP12.54□□□□□ -0.4
RTCB-202ENST00000463455 ACO1P21399 889 aaKnown RBP12.54□□□□□ -0.4
RTCB-202ENST00000463455 GRIA2P42262 883 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 PMS1P54277 932 aaKnown RBP12.54□□□□□ -0.4
RTCB-202ENST00000463455 GAD2Q05329 585 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 DMWDQ09019 674 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 CETN1Q12798 172 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 ORC1Q13415 861 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 CUL2Q13617 745 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 PUM1Q14671 1186 aaKnown RBP eCLIP12.54□□□□□ -0.4
RTCB-202ENST00000463455 CBWD6Q4V339 395 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 CBWD3Q5JTY5 395 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 CBWD5Q5RIA9 395 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 PPP1R26Q5T8A7 1209 aaPredicted RBP12.54□□□□□ -0.4
RTCB-202ENST00000463455 RHBDF2Q6PJF5 856 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 PRR23BQ6ZRT6 265 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 NUDT18Q6ZVK8 323 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 C11orf74Q86VG3 221 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 ARHGAP18Q8N392 663 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 DCLK2Q8N568 766 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 SLC4A11Q8NBS3 891 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 USP33Q8TEY7 942 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 EZH1Q92800 747 aaPredicted RBP12.54□□□□□ -0.4
RTCB-202ENST00000463455 EEF2KMTQ96G04 330 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 HEXIM2Q96MH2 286 aaKnown RBP12.54□□□□□ -0.4
RTCB-202ENST00000463455 PNKPQ96T60 521 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 C2orf42Q9NWW7 574 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 DLL3Q9NYJ7 618 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 KIAA1257Q9ULG3 409 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 MYO16Q9Y6X6 1858 aa12.54□□□□□ -0.4
RTCB-202ENST00000463455 K7EQS6 105 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 AXIN1O15169 862 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 RPP40O75818 363 aaKnown RBP12.53□□□□□ -0.4
RTCB-202ENST00000463455 GNA14O95837 355 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 APODP05090 189 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 TGM1P22735 817 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 TNFRSF4P43489 277 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 RAD23BP54727 409 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 DMC1Q14565 340 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 RAB41Q5JT25 222 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 BTBD8Q5XKL5 378 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 NAIF1Q69YI7 327 aaPredicted RBP12.53□□□□□ -0.4
RTCB-202ENST00000463455 HEATR6Q6AI08 1181 aaKnown RBP12.53□□□□□ -0.4
RTCB-202ENST00000463455 TTI2Q6NXR4 508 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 CEP68Q76N32 757 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 GPRIN1Q7Z2K8 1008 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 CACNA2D4Q7Z3S7 1137 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
RTCB-202ENST00000463455 ETFBKMTQ8IXQ9 262 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 TRIML1Q8N9V2 468 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 ANKRD52Q8NB46 1076 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 ZC3H10Q96K80 434 aaKnown RBP12.53□□□□□ -0.4
RTCB-202ENST00000463455 KLF16Q9BXK1 252 aaPredicted RBP12.53□□□□□ -0.4
RTCB-202ENST00000463455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.53□□□□□ -0.4
RTCB-202ENST00000463455 SPHK2Q9NRA0 654 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.53□□□□□ -0.4
RTCB-202ENST00000463455 DNMT3LQ9UJW3 386 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 LSM7Q9UK45 103 aaKnown RBP12.53□□□□□ -0.4
RTCB-202ENST00000463455 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 MMP17Q9ULZ9 603 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 ZNF510Q9Y2H8 683 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 FRYLO94915 3013 aa12.53□□□□□ -0.4
RTCB-202ENST00000463455 ATG2BQ96BY7 2078 aa12.52□□□□□ -0.4
RTCB-202ENST00000463455 TRIM49BA6NDI0 452 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 CYP26A1O43174 497 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 GREM1O60565 184 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 KAT7O95251 611 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 PAEPP09466 180 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 RALAP11233 206 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 RARGP13631 454 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 FECHP22830 423 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 PLA2G4AP47712 749 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 FMO5P49326 533 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 DGKEP52429 567 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 BCAT1P54687 386 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 MARSP56192 900 aaKnown RBP12.52□□□□□ -0.41
RTCB-202ENST00000463455 MORC3Q14149 939 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 CSRP2Q16527 193 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 LY6G5CQ5SRR4 150 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 TRMT11Q7Z4G4 463 aaKnown RBP12.52□□□□□ -0.41
RTCB-202ENST00000463455 ERCC4Q92889 916 aaPredicted RBP12.52□□□□□ -0.41
RTCB-202ENST00000463455 RMDN1Q96DB5 314 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 ARID3AQ99856 593 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 MARK1Q9P0L2 795 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 WDR35Q9P2L0 1181 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 PCDHGA5Q9Y5G8 931 aa12.52□□□□□ -0.41
RTCB-202ENST00000463455 A0A1W2PQH9 124 aa12.51□□□□□ -0.41
RTCB-202ENST00000463455 PPP1R3GB7ZBB8 358 aa12.51□□□□□ -0.41
RTCB-202ENST00000463455 XPO1O14980 1071 aaKnown RBP12.51□□□□□ -0.41
RTCB-202ENST00000463455 FGFR1OPO95684 399 aaKnown RBP12.51□□□□□ -0.41
RTCB-202ENST00000463455 CCDC192P0DO97 292 aa12.51□□□□□ -0.41
RTCB-202ENST00000463455 VDRP11473 427 aa12.51□□□□□ -0.41
RTCB-202ENST00000463455 UBE2HP62256 183 aa12.51□□□□□ -0.41
RTCB-202ENST00000463455 COG7P83436 770 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms