RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 NPHS2Q9NP85 383 aa9.05□□□□□ -0.96
SHQ1-203ENST00000463369 PXMP2Q9NR77 195 aa9.05□□□□□ -0.96
SHQ1-203ENST00000463369 DNAJC17Q9NVM6 304 aaKnown RBP9.05□□□□□ -0.96
SHQ1-203ENST00000463369 PTTG2Q9NZH5 202 aa9.05□□□□□ -0.96
SHQ1-203ENST00000463369 ASIC3Q9UHC3 531 aa9.05□□□□□ -0.96
SHQ1-203ENST00000463369 SMG5Q9UPR3 1016 aaKnown RBP9.05□□□□□ -0.96
SHQ1-203ENST00000463369 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.05□□□□□ -0.96
SHQ1-203ENST00000463369 ZMYM2Q9UBW7 1377 aa9.05□□□□□ -0.96
SHQ1-203ENST00000463369 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 NPHP3-ACAD11A0A0J9YXS1 232 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 CA12O43570 354 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 STRNO43815 780 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 AKAP3O75969 853 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ABLIM3O94929 683 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 TROVE2P10155 538 aaKnown RBP eCLIP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 COMTP21964 271 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 AMPD1P23109 780 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 RPA3P35244 121 aaPredicted RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 GRIA2P42262 883 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 COPAP53621 1224 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 DRAP1Q14919 205 aaPredicted RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 KRT72Q14CN4 511 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 PGM5Q15124 567 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 P3H1Q32P28 736 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ATP13A4Q4VNC1 1196 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 CFAP157Q5JU67 520 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 PERM1Q5SV97 790 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 TCERG1LQ5VWI1 586 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 OLFML2BQ68BL8 750 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ZNF554Q86TJ5 538 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 SAMD14Q8IZD0 417 aaPredicted RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ARHGAP24Q8N264 748 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 LRRC43Q8N309 656 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 DNERQ8NFT8 737 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 NSUN6Q8TEA1 469 aaKnown RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 CD101Q93033 1021 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 SLC35C1Q96A29 364 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ZNF653Q96CK0 615 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 HAUS1Q96CS2 278 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 NMD3Q96D46 503 aaKnown RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 POLR3CQ9BUI4 534 aaPredicted RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 TRABDQ9H4I3 376 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 PCDH18Q9HCL0 1135 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ALG13Q9NP73 1137 aaKnown RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ZDHHC7Q9NXF8 308 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ANKFY1Q9P2R3 1169 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 HEY2Q9UBP5 337 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 DDX25Q9UHL0 483 aaKnown RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 CPA4Q9UI42 421 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ANAPC5Q9UJX4 755 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 WDR37Q9Y2I8 494 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 PCDHB9Q9Y5E1 797 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 DNAJC25-GNG10A0A024R161 153 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 IGLV3-22A0A075B6J6 115 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 TMEM110-MUSTN1A8MSY1 372 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 FAM86B1E9PN63 330 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 MAGEC1O60732 1142 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 OPHN1O60890 802 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 GAS8O95995 478 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 FAM86B2P0C5J1 330 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 RARBP10826 455 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 FGFR1P11362 822 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 CAPN3P20807 821 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 PGM1P36871 562 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 CETN2P41208 172 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ADARP55265 1226 aaKnown RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 UBXN2AP68543 259 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 CNTN2Q02246 1040 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 CDC16Q13042 620 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 CRHR2Q13324 411 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 PTK6Q13882 451 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 SLC1A5Q15758 541 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 KNOP1Q1ED39 458 aaKnown RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 MAP7D1Q3KQU3 841 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 C1orf53Q5VUE5 145 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ARHGEF16Q5VV41 709 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 C16orf87Q6PH81 154 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 SYDE1Q6ZW31 735 aaPredicted RBP9.04□□□□□ -0.96
SHQ1-203ENST00000463369 PRUNE1Q86TP1 453 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 SATL1Q86VE3 508 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 ABRAQ8N0Z2 381 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 SMYD1Q8NB12 490 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 RFWD2Q8NHY2 731 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 POF1BQ8WVV4 589 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 SLC35B4Q969S0 331 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 COL26A1Q96A83 441 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 LENG9Q96B70 501 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 PWWP2AQ96N64 755 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 TTC25Q96NG3 672 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 MMP19Q99542 508 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 PDCD2LQ9BRP1 358 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 EBF3Q9H4W6 596 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 FNIP2Q9P278 1114 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 TUBGCP4Q9UGJ1 667 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 STRIP2Q9ULQ0 834 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 SH3GLB1Q9Y371 365 aa9.04□□□□□ -0.96
SHQ1-203ENST00000463369 E9PMD0 336 aa9.03□□□□□ -0.96
SHQ1-203ENST00000463369 MEIS1O00470 390 aa9.03□□□□□ -0.96
SHQ1-203ENST00000463369 PDXKO00764 312 aa9.03□□□□□ -0.96
SHQ1-203ENST00000463369 CALUO43852 315 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms