RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 EHBP1Q8NDI1 1231 aa13.78□□□□□ -0.2
HDAC1-203ENST00000463172 IPO9Q96P70 1041 aaKnown RBP13.78□□□□□ -0.2
HDAC1-203ENST00000463172 PNKPQ96T60 521 aa13.78□□□□□ -0.2
HDAC1-203ENST00000463172 DCLK3Q9C098 648 aa13.78□□□□□ -0.2
HDAC1-203ENST00000463172 NUP62CLQ9H1M0 184 aa13.78□□□□□ -0.2
HDAC1-203ENST00000463172 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.78□□□□□ -0.2
HDAC1-203ENST00000463172 TSPAN16Q9UKR8 245 aa13.78□□□□□ -0.2
HDAC1-203ENST00000463172 SMG5Q9UPR3 1016 aaKnown RBP13.78□□□□□ -0.2
HDAC1-203ENST00000463172 USP3Q9Y6I4 520 aa13.78□□□□□ -0.2
HDAC1-203ENST00000463172 CCDC163A0A0D9SF12 145 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 ZBED1O96006 694 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 TDGF1P13385 188 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 TKTL1P51854 596 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 COG7P83436 770 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 OTOGLQ3ZCN5 2332 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 HTR3DQ70Z44 454 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 CEP68Q76N32 757 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 ENOSF1Q7L5Y1 443 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 RPLP0P6Q8NHW5 317 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 GOLGA1Q92805 767 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 ZFRQ96KR1 1074 aaKnown RBP13.77□□□□□ -0.21
HDAC1-203ENST00000463172 XPO6Q96QU8 1125 aaKnown RBP13.77□□□□□ -0.21
HDAC1-203ENST00000463172 OLA1Q9NTK5 396 aaKnown RBP13.77□□□□□ -0.21
HDAC1-203ENST00000463172 WDR35Q9P2L0 1181 aa13.77□□□□□ -0.21
HDAC1-203ENST00000463172 HOXC11O43248 304 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-203ENST00000463172 GRIA2P42262 883 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 MTIF2P46199 727 aaKnown RBP13.76□□□□□ -0.21
HDAC1-203ENST00000463172 FNTBP49356 437 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 MFAP3P55082 362 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 YWHAGP61981 247 aaKnown RBP eCLIP13.76□□□□□ -0.21
HDAC1-203ENST00000463172 SIM2Q14190 667 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-203ENST00000463172 ANO4Q32M45 955 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 HSF5Q4G112 596 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-203ENST00000463172 RAB41Q5JT25 222 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 LY6G5CQ5SRR4 150 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 HEATR6Q6AI08 1181 aaKnown RBP13.76□□□□□ -0.21
HDAC1-203ENST00000463172 RHBDF2Q6PJF5 856 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 LCLAT1Q6UWP7 414 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 PRR23BQ6ZRT6 265 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 SYT13Q7L8C5 426 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 WDR5BQ86VZ2 330 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 MIB1Q86YT6 1006 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 BBS7Q8IWZ6 715 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 SUMF1Q8NBK3 374 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 RNF139Q8WU17 664 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 CNOT6LQ96LI5 555 aaKnown RBP13.76□□□□□ -0.21
HDAC1-203ENST00000463172 KLF16Q9BXK1 252 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-203ENST00000463172 INTS2Q9H0H0 1204 aaKnown RBP13.76□□□□□ -0.21
HDAC1-203ENST00000463172 NMUR1Q9HB89 426 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 ARHGEF4Q9NR80 690 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 SPHK2Q9NRA0 654 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 DEC1Q9P2X7 70 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 RASAL2Q9UJF2 1139 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 SPAG17Q6Q759 2223 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 SPTBN4Q9H254 2564 aa13.76□□□□□ -0.21
HDAC1-203ENST00000463172 K7ESF4 209 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 O00370 1275 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 SCAMP3O14828 347 aaKnown RBP13.75□□□□□ -0.21
HDAC1-203ENST00000463172 MED7O43513 233 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 KAT7O95251 611 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 TBX18O95935 607 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 KRT5P13647 590 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 ERCC5P28715 1186 aaPredicted RBP13.75□□□□□ -0.21
HDAC1-203ENST00000463172 OPRD1P41143 372 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 TNFRSF4P43489 277 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 MRPS21P82921 87 aaKnown RBP13.75□□□□□ -0.21
HDAC1-203ENST00000463172 PDE4CQ08493 712 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 CNGA2Q16280 664 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 CT47A1Q5JQC4 288 aaPredicted RBP13.75□□□□□ -0.21
HDAC1-203ENST00000463172 SMYD5Q6GMV2 418 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 PM20D1Q6GTS8 502 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 LAIR1Q6GTX8 287 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 GBP6Q6ZN66 633 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 RRAGAQ7L523 313 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 TRMT11Q7Z4G4 463 aaKnown RBP13.75□□□□□ -0.21
HDAC1-203ENST00000463172 TTC30AQ86WT1 665 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 UBR7Q8N806 425 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 RBBP8NLQ8NC74 664 aaPredicted RBP13.75□□□□□ -0.21
HDAC1-203ENST00000463172 KCTD13Q8WZ19 329 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 THAP9Q9H5L6 903 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 FBRSL1Q9HCM7 1045 aaKnown RBP13.75□□□□□ -0.21
HDAC1-203ENST00000463172 CNGB3Q9NQW8 809 aa13.75□□□□□ -0.21
HDAC1-203ENST00000463172 KIAA1549LQ6ZVL6 1849 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 GTPBP10A4D1E9 387 aaKnown RBP13.74□□□□□ -0.21
HDAC1-203ENST00000463172 TBC1D3BA6NDS4 549 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 M0QYV0 167 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 ALDH1A2O94788 518 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 APBB3O95704 486 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 CYBBP04839 570 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 CHKAP35790 457 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 SEC13P55735 322 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 EFEMP1Q12805 493 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 DMC1Q14565 340 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 E2F5Q15329 346 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.74□□□□□ -0.21
HDAC1-203ENST00000463172 SCD5Q86SK9 330 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 SCML4Q8N228 414 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 TSTD1Q8NFU3 115 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 LMO3Q8TAP4 145 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms