RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 SP110Q9HB58 689 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 A0A1B0GW55 424 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 TBKBP1A7MCY6 615 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 EIF2S1P05198 315 aaKnown RBP16.29■□□□□ 0.2
SMC4-204ENST00000462787 DUX4L2P0CJ85 424 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 DUX4L3P0CJ86 424 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 DUX4L4P0CJ87 422 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 DUX4L5P0CJ88 424 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 DUX4L6P0CJ89 424 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 DUX4L7P0CJ90 424 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 GP5P40197 560 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 ITGADQ13349 1161 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 ZNF618Q5T7W0 954 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 UNC45BQ8IWX7 931 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 ZNF556Q9HAH1 456 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 SARS2Q9NP81 518 aaKnown RBP16.29■□□□□ 0.2
SMC4-204ENST00000462787 KCNH7Q9NS40 1196 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 DUX4Q9UBX2 424 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 USP18Q9UMW8 372 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 SOX11P35716 441 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 SLC12A3P55017 1021 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 LAMC2Q13753 1193 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 NANOGNBQ7Z5D8 188 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 FBXW8Q8N3Y1 598 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 GIPC3Q8TF64 312 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 SGF29Q96ES7 293 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 ZFYVE19Q96K21 471 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 BDH2Q9BUT1 245 aa16.29■□□□□ 0.2
SMC4-204ENST00000462787 CYP2C8P10632 490 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 RAD23AP54725 363 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.28■□□□□ 0.27e-6■■■□□ 17.7
SMC4-204ENST00000462787 WASHC5Q12768 1159 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 GRTP1Q5TC63 336 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 CAMK1DQ8IU85 385 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 SHCBP1Q8NEM2 672 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 BHLHE22Q8NFJ8 381 aaPredicted RBP16.28■□□□□ 0.2
SMC4-204ENST00000462787 RFWD2Q8NHY2 731 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 RMI1Q9H9A7 625 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 HBS1LQ9Y450 684 aaKnown RBP16.28■□□□□ 0.2
SMC4-204ENST00000462787 TECPR2O15040 1411 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 CCDC78A2IDD5 438 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 HNRNPCL2B2RXH8 293 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 TPBGLP0DKB5 382 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 FOXD4Q12950 439 aaPredicted RBP16.28■□□□□ 0.2
SMC4-204ENST00000462787 CBWD6Q4V339 395 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 CBWD3Q5JTY5 395 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 CBWD5Q5RIA9 395 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 EPS8L1Q8TE68 723 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 FAM193BQ96PV7 902 aaPredicted RBP16.28■□□□□ 0.2
SMC4-204ENST00000462787 PNPLA3Q9NST1 481 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 ACOT9Q9Y305 439 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 C15orf38-AP3S2A0A0A6YYH1 394 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.28■□□□□ 0.2
SMC4-204ENST00000462787 BST1Q10588 318 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 CSTF3Q12996 717 aaKnown RBP16.28■□□□□ 0.2
SMC4-204ENST00000462787 DGKDQ16760 1214 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 ARPINQ7Z6K5 226 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 BORCS5Q969J3 196 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 DNAJC19Q96DA6 116 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 ACSS3Q9H6R3 686 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 AP4B1Q9Y6B7 739 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 TRIM24O15164 1050 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 MAP3K7CLP57077 242 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 NFYCQ13952 458 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 ANO4Q32M45 955 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 EGFL6Q8IUX8 553 aa16.28■□□□□ 0.2
SMC4-204ENST00000462787 R3HDM2Q9Y2K5 976 aaKnown RBP16.28■□□□□ 0.2
SMC4-204ENST00000462787 DDX3YO15523 660 aaKnown RBP16.27■□□□□ 0.2
SMC4-204ENST00000462787 MAFGO15525 162 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 TOMM70O94826 608 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 MMP14P50281 582 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 ARMCX4Q5H9R4 360 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMC4-204ENST00000462787 S100A14Q9HCY8 104 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 SPATA31D1Q6ZQQ2 1576 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 SUPT7LO94864 414 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 ACAT1P24752 427 aaKnown RBP16.27■□□□□ 0.2
SMC4-204ENST00000462787 MPP3Q13368 585 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 ZCCHC23Q6ZST2 131 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 ATPAF2Q8N5M1 289 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 OSBPL11Q9BXB4 747 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 UBE2OQ9C0C9 1292 aaKnown RBP16.27■□□□□ 0.2
SMC4-204ENST00000462787 MPP6Q9NZW5 540 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 ALOX15BO15296 676 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 LIASO43766 372 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 FKBP9O95302 570 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 LDLRP01130 860 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.2
SMC4-204ENST00000462787 CCDC166P0CW27 439 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 MARCKSL1P49006 195 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 SLC10A5Q5PT55 438 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 PPP1R15BQ5SWA1 713 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 FKBP9P1Q75LS8 142 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 ALLCQ8N6M5 410 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 ALG3Q92685 438 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 CGRRF1Q99675 332 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 WDR41Q9HAD4 459 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
SMC4-204ENST00000462787 POLRMTO00411 1230 aaKnown RBP16.27■□□□□ 0.19
SMC4-204ENST00000462787 BIRC5O15392 142 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms