RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 SLC26A11Q86WA9 606 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 C7orf31Q8N865 590 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 RSRC1Q96IZ7 334 aaKnown RBP17.6■□□□□ 0.41
ACTB-207ENST00000462494 KANSL3Q9P2N6 904 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 HEY2Q9UBP5 337 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 HESX1Q9UBX0 185 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 TTLL3Q9Y4R7 772 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 CXorf49A8MYA2 514 aaPredicted RBP17.59■□□□□ 0.41
ACTB-207ENST00000462494 COPEO14579 308 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 NPTXRO95502 500 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 DESP17661 470 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 TMEM62Q0P6H9 643 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 STILQ15468 1287 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 TTC39BQ5VTQ0 682 aaPredicted RBP17.59■□□□□ 0.41
ACTB-207ENST00000462494 TAPT1Q6NXT6 567 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 TLDC1Q6P9B6 456 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 CAND1Q86VP6 1230 aaKnown RBP17.59■□□□□ 0.41
ACTB-207ENST00000462494 TTC39CQ8N584 583 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 SNTG2Q9NY99 539 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 KCNH4Q9UQ05 1017 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 PAPSS1O43252 624 aaPredicted RBP17.59■□□□□ 0.41
ACTB-207ENST00000462494 ADCYAP1R1P41586 468 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 ETV4P43268 484 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 ARFIP2P53365 341 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 ATXN1P54253 815 aaKnown RBP17.59■□□□□ 0.41
ACTB-207ENST00000462494 SLC18A2Q05940 514 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 PPIL2Q13356 520 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 KIZQ2M2Z5 673 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 SLC9A4Q6AI14 798 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 FASTKD5Q7L8L6 764 aaKnown RBP17.59■□□□□ 0.41
ACTB-207ENST00000462494 FAM13CQ8NE31 585 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 OR6B3Q8NGW1 331 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 ZNF398Q8TD17 642 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 KCNV2Q8TDN2 545 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 KHSRPQ92945 711 aaKnown RBP eCLIP17.59■□□□□ 0.41
ACTB-207ENST00000462494 MAGEB5Q9BZ81 275 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 MAD1L1Q9Y6D9 718 aa17.59■□□□□ 0.41
ACTB-207ENST00000462494 BCLAF3A2AJT9 711 aaKnown RBP17.58■□□□□ 0.4
ACTB-207ENST00000462494 CFAP69A5D8W1 941 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 H3BRB1 525 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 DPYSL4O14531 572 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 CYP2F1P24903 491 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 CLNS1AP54105 237 aaKnown RBP17.58■□□□□ 0.4
ACTB-207ENST00000462494 HDAC4P56524 1084 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 ZBTB16Q05516 673 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 GLRA4Q5JXX5 417 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 SH2D5Q6ZV89 423 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 SESTD1Q86VW0 696 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 PPTC7Q8NI37 304 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 CLEC4CQ8WTT0 213 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 TEKT4Q8WW24 435 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 SRPK1Q96SB4 655 aaKnown RBP17.58■□□□□ 0.4
ACTB-207ENST00000462494 TRIM56Q9BRZ2 755 aaKnown RBP17.58■□□□□ 0.4
ACTB-207ENST00000462494 SLC13A1Q9BZW2 595 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 DHX35Q9H5Z1 703 aaKnown RBP17.58■□□□□ 0.4
ACTB-207ENST00000462494 TUT1Q9H6E5 874 aaKnown RBP17.58■□□□□ 0.4
ACTB-207ENST00000462494 POPDC2Q9HBU9 364 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 GEMIN8Q9NWZ8 242 aaKnown RBP17.58■□□□□ 0.4
ACTB-207ENST00000462494 CITO14578 2027 aa17.58■□□□□ 0.4
ACTB-207ENST00000462494 C2orf71A6NGG8 1288 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 HCRTO43612 131 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 KRT37O76014 449 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 STAU1O95793 577 aaKnown RBP17.57■□□□□ 0.4
ACTB-207ENST00000462494 DHRS4L1P0CG22 281 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 BMPR2Q13873 1038 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 CDHR3Q6ZTQ4 885 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 SLC35F5Q8WV83 523 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 RTP4Q96DX8 246 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 CDCA5Q96FF9 252 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 ZMAT2Q96NC0 199 aaKnown RBP17.57■□□□□ 0.4
ACTB-207ENST00000462494 SGIP1Q9BQI5 828 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 C16orf70Q9BSU1 422 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 TMEM120AQ9BXJ8 343 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 SLC4A5Q9BY07 1137 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 NRDE2Q9H7Z3 1164 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 NKX1-2Q9UD57 310 aaPredicted RBP17.57■□□□□ 0.4
ACTB-207ENST00000462494 TUBGCP4Q9UGJ1 667 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 HES2Q9Y543 173 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 NME7Q9Y5B8 376 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 TRIP11Q15643 1979 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.57■□□□□ 0.4
ACTB-207ENST00000462494 A6NJR5 290 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 UGT1A9O60656 530 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 GABBR2O75899 941 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 WFS1O76024 890 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 SNRPAP09012 282 aaKnown RBP17.57■□□□□ 0.4
ACTB-207ENST00000462494 GRM5P41594 1212 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 SERPINB4P48594 390 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 GBE1Q04446 702 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 PRKD1Q15139 912 aaPredicted RBP17.57■□□□□ 0.4
ACTB-207ENST00000462494 PKDCCQ504Y2 493 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 MAMDC4Q6UXC1 1216 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 TMEM110Q86TL2 294 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 CHSY1Q86X52 802 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 NT5DC4Q86YG4 428 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 C18orf25Q96B23 403 aaPredicted RBP17.57■□□□□ 0.4
ACTB-207ENST00000462494 TBCBQ99426 244 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 ZNF670Q9BS34 389 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 DPEP3Q9H4B8 488 aa17.57■□□□□ 0.4
ACTB-207ENST00000462494 UGT1A7Q9HAW7 530 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms