RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 CLSTN2Q9H4D0 955 aa9.28□□□□□ -0.92
SYN3-207ENST00000462268 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
SYN3-207ENST00000462268 CLIC5Q9NZA1 410 aa9.28□□□□□ -0.92
SYN3-207ENST00000462268 DACH1Q9UI36 760 aa9.28□□□□□ -0.92
SYN3-207ENST00000462268 DNMT3LQ9UJW3 386 aa9.28□□□□□ -0.92
SYN3-207ENST00000462268 NAGPAQ9UK23 515 aa9.28□□□□□ -0.92
SYN3-207ENST00000462268 TSPAN16Q9UKR8 245 aa9.28□□□□□ -0.92
SYN3-207ENST00000462268 RAB23Q9ULC3 237 aa9.28□□□□□ -0.92
SYN3-207ENST00000462268 LHX6Q9UPM6 363 aa9.28□□□□□ -0.92
SYN3-207ENST00000462268 SMG5Q9UPR3 1016 aaKnown RBP9.28□□□□□ -0.92
SYN3-207ENST00000462268 SLC8A2Q9UPR5 921 aa9.28□□□□□ -0.92
SYN3-207ENST00000462268 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 O00370 1275 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 SCAMP3O14828 347 aaKnown RBP9.27□□□□□ -0.93
SYN3-207ENST00000462268 HOXC11O43248 304 aaPredicted RBP9.27□□□□□ -0.93
SYN3-207ENST00000462268 IRF1P10914 325 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 OPRD1P41143 372 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 PLA2G4AP47712 749 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 TKTL1P51854 596 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 TPD52L1Q16890 204 aaPredicted RBP9.27□□□□□ -0.93
SYN3-207ENST00000462268 RAB41Q5JT25 222 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 NAIF1Q69YI7 327 aaPredicted RBP9.27□□□□□ -0.93
SYN3-207ENST00000462268 TMEM270Q6UE05 265 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 CLEC17AQ6ZS10 378 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 RSRC2Q7L4I2 434 aaKnown RBP9.27□□□□□ -0.93
SYN3-207ENST00000462268 WDR5BQ86VZ2 330 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 TTC30AQ86WT1 665 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 BBS7Q8IWZ6 715 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 ZNF276Q8N554 614 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 UBR7Q8N806 425 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 SUMF1Q8NBK3 374 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 RPLP0P6Q8NHW5 317 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 CNOT6LQ96LI5 555 aaKnown RBP9.27□□□□□ -0.93
SYN3-207ENST00000462268 FAM81BQ96LP2 452 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 GBP4Q96PP9 640 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 KLF16Q9BXK1 252 aaPredicted RBP9.27□□□□□ -0.93
SYN3-207ENST00000462268 INTS2Q9H0H0 1204 aaKnown RBP9.27□□□□□ -0.93
SYN3-207ENST00000462268 NUP62CLQ9H1M0 184 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 NMUR1Q9HB89 426 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 LRRC4Q9HBW1 653 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 FBRSL1Q9HCM7 1045 aaKnown RBP9.27□□□□□ -0.93
SYN3-207ENST00000462268 NCDNQ9UBB6 729 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 GMEB2Q9UKD1 530 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 STRIP2Q9ULQ0 834 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 PCDHB4Q9Y5E5 795 aa9.27□□□□□ -0.93
SYN3-207ENST00000462268 C2orf72A6NCS6 295 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 TBX18O95935 607 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 ZBED1O96006 694 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 APODP05090 189 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 FNTBP49356 437 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 PGFP49763 221 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 YWHAGP61981 247 aaKnown RBP eCLIP9.26□□□□□ -0.93
SYN3-207ENST00000462268 COG7P83436 770 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 PDE4CQ08493 712 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 GAB4Q2WGN9 574 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 HSF5Q4G112 596 aaPredicted RBP9.26□□□□□ -0.93
SYN3-207ENST00000462268 LY6G5CQ5SRR4 150 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 PKN3Q6P5Z2 889 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 RHBDF2Q6PJF5 856 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 LCLAT1Q6UWP7 414 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 NUDT18Q6ZVK8 323 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 HTR3DQ70Z44 454 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 ENOSF1Q7L5Y1 443 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 SYT13Q7L8C5 426 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 SCD5Q86SK9 330 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 MIB1Q86YT6 1006 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 FAM114A1Q8IWE2 563 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 SIX6OS1Q8N1H7 587 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 CAMKK1Q8N5S9 505 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 GPR161Q8N6U8 529 aaKnown RBP9.26□□□□□ -0.93
SYN3-207ENST00000462268 RBBP8NLQ8NC74 664 aaPredicted RBP9.26□□□□□ -0.93
SYN3-207ENST00000462268 EHBP1Q8NDI1 1231 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 LMO3Q8TAP4 145 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 KCTD13Q8WZ19 329 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 IPO9Q96P70 1041 aaKnown RBP9.26□□□□□ -0.93
SYN3-207ENST00000462268 PNKPQ96T60 521 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 ARHGEF4Q9NR80 690 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 SPHK2Q9NRA0 654 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 OLA1Q9NTK5 396 aaKnown RBP9.26□□□□□ -0.93
SYN3-207ENST00000462268 OSER1Q9NX31 292 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 RASAL2Q9UJF2 1139 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.26□□□□□ -0.93
SYN3-207ENST00000462268 ZNF510Q9Y2H8 683 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 USP34Q70CQ2 3546 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 TICRRQ7Z2Z1 1910 aa9.26□□□□□ -0.93
SYN3-207ENST00000462268 ZFHX2Q9C0A1 2572 aaPredicted RBP9.26□□□□□ -0.93
SYN3-207ENST00000462268 GOLGA6L22H0YM25 854 aa9.25□□□□□ -0.93
SYN3-207ENST00000462268 M0QYV0 167 aa9.25□□□□□ -0.93
SYN3-207ENST00000462268 MDM4O15151 490 aa9.25□□□□□ -0.93
SYN3-207ENST00000462268 KAT7O95251 611 aa9.25□□□□□ -0.93
SYN3-207ENST00000462268 APBB3O95704 486 aa9.25□□□□□ -0.93
SYN3-207ENST00000462268 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
SYN3-207ENST00000462268 ERCC5P28715 1186 aaPredicted RBP9.25□□□□□ -0.93
SYN3-207ENST00000462268 GRIA2P42262 883 aa9.25□□□□□ -0.93
SYN3-207ENST00000462268 MFAP3P55082 362 aa9.25□□□□□ -0.93
SYN3-207ENST00000462268 MRPS21P82921 87 aaKnown RBP9.25□□□□□ -0.93
SYN3-207ENST00000462268 DMWDQ09019 674 aa9.25□□□□□ -0.93
SYN3-207ENST00000462268 ADIGQ0VDE8 80 aa9.25□□□□□ -0.93
SYN3-207ENST00000462268 SIM2Q14190 667 aaPredicted RBP9.25□□□□□ -0.93
SYN3-207ENST00000462268 DMC1Q14565 340 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms