RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SSX2IPQ9Y2D8 614 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 UBE2J1Q9Y385 318 aaPredicted RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 SNX14Q9Y5W7 946 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 PNMA6EA0A0J9YXQ4 647 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 A0A1B0GVC2 190 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 GXYLT2A0PJZ3 443 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 CCDC78A2IDD5 438 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 CCDC151A5D8V7 595 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 J3KTA2 159 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 FAM20BO75063 409 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 WDHD1O75717 1129 aaPredicted RBP3.49□□□□□ -1.85
HDAC6-212ENST00000461608 USP1O94782 785 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 WDR47O94967 919 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 TK1P04183 234 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 LIPAP38571 399 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 AVPR1BP47901 424 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 TPTEP56180 551 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 VAMP2P63027 116 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 TLE2Q04725 743 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 SCAPQ12770 1279 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 ACOX1Q15067 660 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 PTPRRQ15256 657 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 TBRG1Q3YBR2 411 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 USP39Q53GS9 565 aaKnown RBP3.49□□□□□ -1.85
HDAC6-212ENST00000461608 PLAC9Q5JTB6 97 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 LY6G5CQ5SRR4 150 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 INTS11Q5TA45 600 aaKnown RBP3.49□□□□□ -1.85
HDAC6-212ENST00000461608 TTC22Q5TAA0 569 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 DEPDC1Q5TB30 811 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 VPS53Q5VIR6 699 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 JAKMIP3Q5VZ66 844 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 JMJD6Q6NYC1 403 aaPredicted RBP3.49□□□□□ -1.85
HDAC6-212ENST00000461608 RNF207Q6ZRF8 634 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 LRRTM4Q86VH4 590 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 C2CD5Q86YS7 1000 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.49□□□□□ -1.85
HDAC6-212ENST00000461608 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.49□□□□□ -1.85
HDAC6-212ENST00000461608 USP38Q8NB14 1042 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 RP9Q8TA86 221 aaKnown RBP3.49□□□□□ -1.85
HDAC6-212ENST00000461608 IL17DQ8TAD2 202 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 SUN3Q8TAQ9 357 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 OVCA2Q8WZ82 227 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 HAS1Q92839 578 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 FKBP10Q96AY3 582 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 EVI5LQ96CN4 794 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 PTCD3Q96EY7 689 aaKnown RBP3.49□□□□□ -1.85
HDAC6-212ENST00000461608 FAR2Q96K12 515 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 ADAM2Q99965 735 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 PAAF1Q9BRP4 392 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 AMBRA1Q9C0C7 1298 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 ZNF768Q9H5H4 540 aaKnown RBP3.49□□□□□ -1.85
HDAC6-212ENST00000461608 KLC4Q9NSK0 619 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 KCTD5Q9NXV2 234 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 SAGE1Q9NXZ1 904 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 TESQ9UGI8 421 aaKnown RBP3.49□□□□□ -1.85
HDAC6-212ENST00000461608 TBC1D30Q9Y2I9 924 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 TMEM98Q9Y2Y6 226 aa3.49□□□□□ -1.85
HDAC6-212ENST00000461608 HMX3A6NHT5 357 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 ADM5C9JUS6 153 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 EIF3FO00303 357 aaPredicted RBP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 EXOC5O00471 708 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 MPPED1O15442 326 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 DHHO43323 396 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 TMPRSS11DO60235 418 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 TJP3O95049 919 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 SPDEFO95238 335 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 NDUFA10O95299 355 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 TFRCP02786 760 aaKnown RBP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 TMEM225BP0DP42 221 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 HGFP14210 728 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 MMP8P22894 467 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 GATA3P23771 443 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 ADORA2AP29274 412 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 AKT1P31749 480 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 HTR7P34969 479 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 ADD2P35612 726 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 GSTM5P46439 218 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 AARSP49588 968 aaKnown RBP eCLIP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 EIF4A1P60842 406 aaKnown RBP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 ACTR2P61160 394 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 FAM189BP81408 668 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 TAP1Q03518 808 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 CBFBQ13951 182 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 TIGD6Q17RP2 521 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 PTCHD3Q3KNS1 767 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 VWA1Q6PCB0 445 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 KCNV1Q6PIU1 500 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 RHOUQ7L0Q8 258 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 ZNF804AQ7Z570 1209 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 WDR53Q7Z5U6 358 aaPredicted RBP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 MRGPRGQ86SM5 289 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 TRABD2AQ86V40 505 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 FTSJ3Q8IY81 847 aaKnown RBP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 MYCBPAPQ8TBZ2 947 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 CACTINQ8WUQ7 758 aaKnown RBP3.48□□□□□ -1.85
HDAC6-212ENST00000461608 TMEM171Q8WVE6 324 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 SLC9A6Q92581 669 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 EXTL1Q92935 676 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 VOPP1Q96AW1 172 aa3.48□□□□□ -1.85
HDAC6-212ENST00000461608 ZNF503Q96F45 646 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms