RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 SUSD3Q96L08 255 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 ZIM3Q96PE6 472 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 UCN2Q96RP3 112 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 PEBP4Q96S96 227 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 TBCBQ99426 244 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 SMOQ99835 787 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 ACBD6Q9BR61 282 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 SNRNP25Q9BV90 132 aaKnown RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 COLEC11Q9BWP8 271 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 RHOBTB2Q9BYZ6 727 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 FRMD8P1Q9BZ68 369 aaPredicted RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 ULBP1Q9BZM6 244 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 RAB6CQ9H0N0 254 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 HIPK3Q9H422 1215 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 DHX35Q9H5Z1 703 aaKnown RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 FAM204AQ9H8W3 233 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 TBC1D13Q9NVG8 400 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 FAM53CQ9NYF3 392 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 WHRNQ9P202 907 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 BCCIPQ9P287 314 aaKnown RBP eCLIP7.09□□□□□ -1.27
MSH2-204ENST00000461394 DNPEPQ9ULA0 475 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 AP4E1Q9UPM8 1137 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 ATP11BQ9Y2G3 1177 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 FAN1Q9Y2M0 1017 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 PATJQ8NI35 1801 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 GOLGA6CA6NDK9 693 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 F8W810 466 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 M0QYT0 321 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 M0QZQ0 153 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ENPP3O14638 875 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 GPR37L1O60883 481 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 NBNO60934 754 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 RNF40O75150 1001 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 UPP2O95045 317 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 CYP11A1P05108 521 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ITGB1P05556 798 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 USP17L7P0C7H9 530 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 GOLGA6DP0CG33 693 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 COL6A1P12109 1028 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 NCAM1P13591 858 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ITIH2P19823 946 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 TYMPP19971 482 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 NOS2P35228 1153 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ACTN2P35609 894 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 HSD17B3P37058 310 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ARL4AP40617 200 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 MATKP42679 507 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 AARSP49588 968 aaKnown RBP eCLIP7.08□□□□□ -1.28
MSH2-204ENST00000461394 NDUFV1P49821 464 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 GATMP50440 423 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 CDK7P50613 346 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ARSEP51690 589 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ITGA8P53708 1063 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 DRG2P55039 364 aaKnown RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 VCPP55072 806 aaKnown RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 YWHAZP63104 245 aaKnown RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 ROR1Q01973 937 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ADCY2Q08462 1091 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 GPS1Q13098 491 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 DPYSL3Q14195 570 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 SLMAPQ14BN4 828 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 P3H1Q32P28 736 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 TRIM60Q495X7 471 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 CTXN3Q4LDR2 81 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 SLC39A12Q504Y0 691 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 PLEKHG4Q58EX7 1191 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ZC3H12AQ5D1E8 599 aaKnown RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 EFHC2Q5JST6 749 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 CEP85LQ5SZL2 805 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 SPOUT1Q5T280 376 aaKnown RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 DENND2CQ68D51 928 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 SLC39A5Q6ZMH5 540 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 CEP128Q6ZU80 1094 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 PAQR9Q6ZVX9 377 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 BBS12Q6ZW61 710 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 TMC3Q7Z5M5 1100 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ZC3H18Q86VM9 953 aaKnown RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 FAM131BQ86XD5 332 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 COLGALT2Q8IYK4 626 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 MREGQ8N565 214 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 TAB3Q8N5C8 712 aaPredicted RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 ZNF454Q8N9F8 522 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 CMASQ8NFW8 434 aaPredicted RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 PRR7Q8TB68 274 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 ACTL9Q8TC94 416 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 FBXO25Q8TCJ0 367 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 TEKT4Q8WW24 435 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 RIN2Q8WYP3 895 aaPredicted RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 SLCO2A1Q92959 643 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 TMEM209Q96SK2 561 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 KCNK16Q96T55 309 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 TMEM121Q9BTD3 319 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 DDX23Q9BUQ8 820 aaKnown RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 MRPL9Q9BYD2 267 aaKnown RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 FAM129AQ9BZQ8 928 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 POPDC2Q9HBU9 364 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 DMAP1Q9NPF5 467 aaPredicted RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 PAK6Q9NQU5 681 aaPredicted RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 DNAJC17Q9NVM6 304 aaKnown RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 GOLGA6AQ9NYA3 693 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms