RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 MINDY1Q8N5J2 469 aa15.41■□□□□ 0.06
DNMT3A-207ENST00000461228 GLIS3Q8NEA6 775 aa15.41■□□□□ 0.06
DNMT3A-207ENST00000461228 XPO6Q96QU8 1125 aaKnown RBP15.41■□□□□ 0.06
DNMT3A-207ENST00000461228 USP28Q96RU2 1077 aa15.41■□□□□ 0.06
DNMT3A-207ENST00000461228 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.41■□□□□ 0.06
DNMT3A-207ENST00000461228 KRT82Q9NSB4 513 aa15.41■□□□□ 0.06
DNMT3A-207ENST00000461228 WDR35Q9P2L0 1181 aa15.41■□□□□ 0.06
DNMT3A-207ENST00000461228 ZBTB24O43167 697 aaPredicted RBP15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 HYAL3O43820 417 aaPredicted RBP15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 CST3P01034 146 aaPredicted RBP15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 CFIP05156 583 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 ZNF883P0CG24 379 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 P4HA1P13674 534 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 NDUFV2P19404 249 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 TRIM21P19474 475 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 TRPC3Q13507 836 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 ENPP2Q13822 863 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 ZNF699Q32M78 642 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 PAQR9Q6ZVX9 377 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 UNC13DQ70J99 1090 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 UNC93AQ86WB7 457 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 FUKQ8N0W3 1084 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 IQUBQ8NA54 791 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 LINC00301Q8NCQ3 95 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 NOC3LQ8WTT2 800 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 SCFD1Q8WVM8 642 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 TAF4BQ92750 862 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 ZNF419Q96HQ0 510 aaPredicted RBP15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 C7orf25Q9BPX7 421 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 PCED1AQ9H1Q7 454 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 TLR8Q9NR97 1041 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 SLC27A6Q9Y2P4 619 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 PCDHA5Q9Y5H7 936 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 ADAMTS20P59510 1910 aa15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 ATXN2Q99700 1313 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-207ENST00000461228 TP53BP1Q12888 1972 aaPredicted RBP15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 ANTXRLA6NF34 631 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 YEATS4O95619 227 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 ABL1P00519 1130 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 IGLV3-19P01714 112 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 CD59P13987 128 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 SPINK2P20155 84 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 MYL6P60660 151 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 ASIC1P78348 528 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 ZNF667Q5HYK9 610 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 SYCP2LQ5T4T6 812 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 ARMCX6Q7L4S7 300 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 SLC9A9Q8IVB4 645 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 IPO4Q8TEX9 1081 aaKnown RBP15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 ADAMTS14Q8WXS8 1223 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 CCSER2Q9H7U1 834 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 GMIPQ9P107 970 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 USP36Q9P275 1121 aaKnown RBP15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 TFIP11Q9UBB9 837 aaKnown RBP15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 DKK4Q9UBT3 224 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 LSM7Q9UK45 103 aaKnown RBP15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 KLK13Q9UKR3 277 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 HCN2Q9UL51 889 aa15.39■□□□□ 0.05
DNMT3A-207ENST00000461228 COL5A1P20908 1838 aaPredicted RBP15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 PVALEFA0A1B0GWK0 134 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 TOP3BO95985 862 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 RPN1P04843 607 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 GNSP15586 552 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 PSEN1P49768 467 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 ENPEPQ07075 957 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 INCA1Q0VD86 236 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 EIF4HQ15056 248 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 WDR45BQ5MNZ6 344 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 EMC10Q5UCC4 262 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 EGFLAMQ63HQ2 1017 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 SDE2Q6IQ49 451 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 Q6ZNB5 142 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 TADA2BQ86TJ2 420 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 TTC30AQ86WT1 665 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 TMEM25Q86YD3 366 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 SLC41A1Q8IVJ1 513 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 CHPFQ8IZ52 775 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 CRYBG2Q8N1P7 616 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 FRMD1Q8N878 549 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 ZMIZ2Q8NF64 920 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 CADM4Q8NFZ8 388 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 DNASE2BQ8WZ79 361 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 CCDC127Q96BQ5 260 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 HSPA12BQ96MM6 686 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 CDK5RAP1Q96SZ6 601 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 KCNK16Q96T55 309 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 BACH2Q9BYV9 841 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 SMYD3Q9H7B4 428 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 DNAJC17Q9NVM6 304 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 FBXO10Q9UK96 956 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 SCML2Q9UQR0 700 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 MTMR6Q9Y217 621 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 PLXNB3Q9ULL4 1909 aa15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 GCN1Q92616 2671 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-207ENST00000461228 CLDN5O00501 218 aa15.37■□□□□ 0.05
DNMT3A-207ENST00000461228 AP1G2O75843 785 aa15.37■□□□□ 0.05
DNMT3A-207ENST00000461228 PDIA4P13667 645 aaKnown RBP15.37■□□□□ 0.05
DNMT3A-207ENST00000461228 TYRP14679 529 aa15.37■□□□□ 0.05
DNMT3A-207ENST00000461228 CYP2J2P51589 502 aa15.37■□□□□ 0.05
DNMT3A-207ENST00000461228 NCOA4Q13772 614 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms