RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 OVCH2Q7RTZ1 564 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 TMC6Q7Z403 805 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 MTERF4Q7Z6M4 381 aaKnown RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 NEK8Q86SG6 692 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 DPP9Q86TI2 863 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 DENND1CQ8IV53 801 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 IQCF2Q8IXL9 164 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 KIAA0319LQ8IZA0 1049 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 FAM26EQ8N5C1 309 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 ZBTB34Q8NCN2 500 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 VPS37AQ8NEZ2 397 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 BICD2Q8TD16 824 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 CRYGNQ8WXF5 182 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 TRIB2Q92519 343 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 USP6NLQ92738 828 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 LENG9Q96B70 501 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 HIST1H2AHQ96KK5 128 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 MPHOSPH6Q99547 160 aaKnown RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 HIST1H2AJQ99878 128 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 WDR11Q9BZH6 1224 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 TSPYL1Q9H0U9 437 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 MROH8Q9H579 483 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 MED4Q9NPJ6 270 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 PDGFCQ9NRA1 345 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 SAGE1Q9NXZ1 904 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 ARHGAP20Q9P2F6 1191 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 CGNQ9P2M7 1197 aaKnown RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 FBXO40Q9UH90 709 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 GJD2Q9UKL4 321 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 PLA2G2DQ9UNK4 145 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 TRIM17Q9Y577 477 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 TRIP12Q14669 1992 aaPredicted RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 IGLV3-22A0A075B6J6 115 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 PP2D1A8MPX8 630 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 FAM227AF5H4B4 570 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 TPP1O14773 563 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 HYAL3O43820 417 aaPredicted RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 NEMFO60524 1076 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 BAG4O95429 457 aaKnown RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 SNAI1O95863 264 aaPredicted RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 LDHAP00338 332 aaKnown RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 TPM3P06753 285 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 ITGB5P18084 799 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 CCND2P30279 289 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 IL12RB1P42701 662 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 FXR1P51114 621 aaKnown RBP eCLIP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 ZNF132P52740 706 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 IL13RA1P78552 427 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 NUCB2P80303 420 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 CCDC15Q0P6D6 951 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 MGAT2Q10469 447 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 DHX8Q14562 1220 aaKnown RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 IL17AQ16552 155 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 GALNT17Q6IS24 598 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 KLHDC10Q6PID8 442 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 SEPT14Q6ZU15 432 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 GAREM2Q75VX8 874 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 KRT77Q7Z794 578 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 B3GNT8Q7Z7M8 397 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 PLA2G4DQ86XP0 818 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 GLB1L2Q8IW92 636 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 ELOA2Q8IYF1 753 aaPredicted RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 GRAMD1CQ8IYS0 662 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 PPM1NQ8N819 430 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 TRPV1Q8NER1 839 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 OR5AN1Q8NGI8 311 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 WDR48Q8TAF3 677 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 NRG4Q8WWG1 115 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 CCDC47Q96A33 483 aaKnown RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 CLIC6Q96NY7 704 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 POLR3CQ9BUI4 534 aaPredicted RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 KATNBL1Q9H079 304 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 CHCHD3Q9NX63 227 aaKnown RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 UTP6Q9NYH9 597 aaKnown RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 SRRDQ9UH36 339 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 DDX25Q9UHL0 483 aaKnown RBP5.43□□□□□ -1.54
SF3A3-202ENST00000460925 ODF2LQ9ULJ1 636 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 USP18Q9UMW8 372 aa5.43□□□□□ -1.54
SF3A3-202ENST00000460925 EVPLQ92817 2033 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 A0A0A6YYK5 440 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 ERICH4A6NGS2 130 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 CCDC154A6NI56 674 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 TRIM64CA6NLI5 447 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 MSH4O15457 936 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 CHMP2AO43633 222 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 B3GALT2O43825 422 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 ATP9AO75110 1047 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 TPPPO94811 219 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 UBXN7O94888 489 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 FOSP01100 380 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 COL6A1P12109 1028 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 XPAP23025 273 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 CCND3P30281 292 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-202ENST00000460925 CDC25AP30304 524 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 ATICP31939 592 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 MAN1A1P33908 653 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 RGS2P41220 211 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 MAGEA8P43361 318 aa5.42□□□□□ -1.54
SF3A3-202ENST00000460925 AGFG1P52594 562 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms