RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 JPH3Q8WXH2 748 aaPredicted RBP3.21□□□□□ -1.9
SYPL1-203ENST00000460770 HOOK2Q96ED9 719 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 ARL8BQ9NVJ2 186 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 DDX56Q9NY93 547 aaKnown RBP3.21□□□□□ -1.9
SYPL1-203ENST00000460770 HDAC9Q9UKV0 1011 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 IGLV5-39A0A0G2JS06 123 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 CAPN8A6NHC0 703 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 LACTBL1A8MY62 500 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 ISM1B1AKI9 464 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 PRSS44E7EML9 344 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 AKAP10O43572 662 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 SPRY2O43597 315 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 TBXAS1P24557 533 aaPredicted RBP3.2□□□□□ -1.9
SYPL1-203ENST00000460770 ADRA1DP25100 572 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 PTDSS1P48651 473 aaKnown RBP3.2□□□□□ -1.9
SYPL1-203ENST00000460770 ALDH7A1P49419 539 aaKnown RBP3.2□□□□□ -1.9
SYPL1-203ENST00000460770 NANOS2P60321 138 aaKnown RBP3.2□□□□□ -1.9
SYPL1-203ENST00000460770 MTX1Q13505 466 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 ARHGEF7Q14155 803 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 SLC29A2Q14542 456 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 AWAT1Q58HT5 328 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 YAF2Q8IY57 180 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 CHPFQ8IZ52 775 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 ZNF548Q8NEK5 533 aaPredicted RBP3.2□□□□□ -1.9
SYPL1-203ENST00000460770 CTHRC1Q96CG8 243 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 TMEM204Q9BSN7 226 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 TUBB6Q9BUF5 446 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 USP29Q9HBJ7 922 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 DECR2Q9NUI1 292 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 LPAR3Q9UBY5 353 aa3.2□□□□□ -1.9
SYPL1-203ENST00000460770 SPATA31A1Q5TZJ5 1347 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 PYCARD-AS1I3L0S3 204 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 RRP9O43818 475 aaKnown RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 ZC3H11AO75152 810 aaKnown RBP eCLIP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 PARP1P09874 1014 aaKnown RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 JAK3P52333 1124 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 AGFG1P52594 562 aaKnown RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 YPEL5P62699 121 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 CCDC15Q0P6D6 951 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 PIN1Q13526 163 aaPredicted RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 CLCA4Q14CN2 919 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 ZNF549Q6P9A3 640 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 FAM57BQ71RH2 274 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 B4GALNT4Q76KP1 1039 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 EDC3Q96F86 508 aaKnown RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 NUAK2Q9H093 628 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 ZMAT3Q9HA38 289 aaKnown RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 SMURF2Q9HAU4 748 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 SEMA4BQ9NPR2 832 aaPredicted RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 TYW1Q9NV66 732 aaKnown RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 TMEM45AQ9NWC5 275 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 SELENONQ9NZV5 590 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 DNMT3BQ9UBC3 853 aaKnown RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 GABBR1Q9UBS5 961 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 AFF4Q9UHB7 1163 aaKnown RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 ZNF180Q9UJW8 692 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 FZD4Q9ULV1 537 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.19□□□□□ -1.9
SYPL1-203ENST00000460770 CADPSQ9ULU8 1353 aa3.19□□□□□ -1.9
SYPL1-203ENST00000460770 TRIM43BA6NCK2 446 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 FAM227AF5H4B4 570 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 F8W810 466 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 FYB1O15117 783 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 KRT86O43790 486 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 PLAUP00749 431 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 SLC3A2P08195 630 aaKnown RBP3.18□□□□□ -1.9
SYPL1-203ENST00000460770 TPH1P17752 444 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 MT3P25713 68 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 ACVR2AP27037 513 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 CPT1AP50416 773 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 PGGT1BP53609 377 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 EIF4A1P60842 406 aaKnown RBP3.18□□□□□ -1.9
SYPL1-203ENST00000460770 STK3Q13188 491 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 SLC14A1Q13336 389 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 KRT81Q14533 505 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 SEC23BQ15437 767 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 MAEAQ7L5Y9 396 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 TRAPPC11Q7Z392 1133 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 UEVLDQ8IX04 471 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 OR56A3Q8NH54 315 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 IL31RAQ8NI17 732 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 SLC35G2Q8TBE7 412 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 TRIM43Q96BQ3 446 aaPredicted RBP3.18□□□□□ -1.9
SYPL1-203ENST00000460770 WDYHV1Q96HA8 205 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 ZBTB45Q96K62 511 aaPredicted RBP3.18□□□□□ -1.9
SYPL1-203ENST00000460770 HIST1H2AAQ96QV6 131 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 MEIS3Q99687 375 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 ZPBPQ9BS86 351 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 STK31Q9BXU1 1019 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 FAM204AQ9H8W3 233 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 MRPL44Q9H9J2 332 aaKnown RBP3.18□□□□□ -1.9
SYPL1-203ENST00000460770 MLXIPQ9HAP2 919 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 SACM1LQ9NTJ5 587 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 DNAJB11Q9UBS4 358 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 RGS17Q9UGC6 210 aaPredicted RBP3.18□□□□□ -1.9
SYPL1-203ENST00000460770 TPCN1Q9ULQ1 816 aa3.18□□□□□ -1.9
SYPL1-203ENST00000460770 NOP58Q9Y2X3 529 aaKnown RBP3.18□□□□□ -1.9
SYPL1-203ENST00000460770 ZNF335Q9H4Z2 1342 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms