RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 NCAM1P13591 858 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 KDELR1P24390 212 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 RPL10AP62906 217 aaKnown RBP16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 DUSP4Q13115 394 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 SIX1Q15475 284 aaPredicted RBP16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 RASIP1Q5U651 963 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 SDHAF4Q5VUM1 108 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 BSPRYQ5W0U4 402 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 SPOCD1Q6ZMY3 1216 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 KLHL7Q8IXQ5 586 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 KCTD6Q8NC69 237 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 ACSF2Q96CM8 615 aaPredicted RBP16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 KRT12Q99456 494 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 SEPT5Q99719 369 aaPredicted RBP16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 EPC1Q9H2F5 836 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 ANKZF1Q9H8Y5 726 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 COMMD8Q9NX08 183 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 IL37Q9NZH6 218 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 AFF4Q9UHB7 1163 aaKnown RBP16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 SCML2Q9UQR0 700 aa16.53■□□□□ 0.24
PCYT1A-212ENST00000460677 MDM4O15151 490 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 ABLIM3O94929 683 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 RDXP35241 583 aaKnown RBP16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 CDKN2BP42772 138 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 TUFMP49411 452 aaKnown RBP16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 YWHAGP61981 247 aaKnown RBP eCLIP16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 IFRD2Q12894 506 aaPredicted RBP16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 LLGL1Q15334 1064 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 TFDP3Q5H9I0 405 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 OTUD1Q5VV17 481 aaPredicted RBP16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 TPGS2Q68CL5 300 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 C8orf74Q6P047 294 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 ANKS1BQ7Z6G8 1248 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 ZDHHC14Q8IZN3 488 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 PRELID2Q8N945 189 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 ZNF461Q8TAF7 563 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 HSPH1Q92598 858 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 PGAP3Q96FM1 320 aaPredicted RBP16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 CEP295NLQ96MC4 621 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 HERPUD2Q9BSE4 406 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 LRRC1Q9BTT6 524 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 HEMGNQ9BXL5 484 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 SLITRK6Q9H5Y7 841 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 MRPL17Q9NRX2 175 aaKnown RBP16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 HSFX1Q9UBD0 423 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 EFR3BQ9Y2G0 817 aa16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 COL4A4P53420 1690 aaPredicted RBP16.52■□□□□ 0.24
PCYT1A-212ENST00000460677 hCG_1818297A0A087WSY0 165 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 TARSL2A2RTX5 802 aaKnown RBP16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 M0QYT0 321 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 SOAT2O75908 522 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 RTN3O95197 1032 aaPredicted RBP16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 ARSEP51690 589 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 ATXN1P54253 815 aaKnown RBP16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 PITX1P78337 314 aaPredicted RBP16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 CREMQ03060 361 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 DEUP1Q05D60 604 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 KLF1Q13351 362 aaPredicted RBP16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 RAB33AQ14088 237 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 PDK2Q15119 407 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 TAZQ16635 292 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 CYP1B1Q16678 543 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 ERMARDQ5T6L9 678 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 DENND5BQ6ZUT9 1274 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 MON1AQ86VX9 555 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 KLHL23Q8NBE8 558 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 SLC7A14Q8TBB6 771 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 EDEM1Q92611 657 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 ABHD8Q96I13 439 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 SNRNP25Q9BV90 132 aaKnown RBP16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 PARD6BQ9BYG5 372 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 DDX47Q9H0S4 455 aaKnown RBP16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 ZBP1Q9H171 429 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 ABCC13Q9NSE7 274 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 CALCOCO1Q9P1Z2 691 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 FNIP2Q9P278 1114 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 SSX2IPQ9Y2D8 614 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 FAM92AA1XBS5 289 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 LILRB3O75022 631 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 PHF2O75151 1096 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 TJP3O95049 919 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 F9P00740 461 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 TUBBP07437 444 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 CTSAP10619 480 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 KRT10P13645 584 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 ATF2P15336 505 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 YWHAQP27348 245 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 BMPR1AP36894 532 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 CDH6P55285 790 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 USP46P62068 366 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 BTBD8Q5XKL5 378 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 SCD5Q86SK9 330 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 VSIG1Q86XK7 387 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 MAP7D3Q8IWC1 876 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 ARHGAP18Q8N392 663 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 C12orf50Q8NA57 414 aaPredicted RBP16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 CCDC26Q8TAB7 109 aa16.51■□□□□ 0.23
PCYT1A-212ENST00000460677 GPR152Q8TDT2 470 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms