RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ZNF618Q5T7W0 954 aa4□□□□□ -1.77
RFC4-211ENST00000460408 TEDDM1Q5T9Z0 273 aa4□□□□□ -1.77
RFC4-211ENST00000460408 TANGO2Q6ICL3 276 aa4□□□□□ -1.77
RFC4-211ENST00000460408 Q6ZNX1 250 aa4□□□□□ -1.77
RFC4-211ENST00000460408 MYCT1Q8N699 235 aa4□□□□□ -1.77
RFC4-211ENST00000460408 ANKRD42Q8N9B4 389 aa4□□□□□ -1.77
RFC4-211ENST00000460408 ATG16L2Q8NAA4 619 aa4□□□□□ -1.77
RFC4-211ENST00000460408 TOR1AIP2Q8NFQ8 470 aa4□□□□□ -1.77
RFC4-211ENST00000460408 STT3BQ8TCJ2 826 aa4□□□□□ -1.77
RFC4-211ENST00000460408 GLG1Q92896 1179 aa4□□□□□ -1.77
RFC4-211ENST00000460408 FKBP10Q96AY3 582 aa4□□□□□ -1.77
RFC4-211ENST00000460408 EID2BQ96D98 161 aa4□□□□□ -1.77
RFC4-211ENST00000460408 RSPRY1Q96DX4 576 aa4□□□□□ -1.77
RFC4-211ENST00000460408 PBKQ96KB5 322 aa4□□□□□ -1.77
RFC4-211ENST00000460408 AIFM2Q9BRQ8 373 aa4□□□□□ -1.77
RFC4-211ENST00000460408 ALG8Q9BVK2 526 aa4□□□□□ -1.77
RFC4-211ENST00000460408 KATNAL1Q9BW62 490 aa4□□□□□ -1.77
RFC4-211ENST00000460408 MAGEH1Q9H213 219 aa4□□□□□ -1.77
RFC4-211ENST00000460408 CASS4Q9NQ75 786 aa4□□□□□ -1.77
RFC4-211ENST00000460408 DKK3Q9UBP4 350 aa4□□□□□ -1.77
RFC4-211ENST00000460408 TESQ9UGI8 421 aaKnown RBP4□□□□□ -1.77
RFC4-211ENST00000460408 GABRQQ9UN88 632 aa4□□□□□ -1.77
RFC4-211ENST00000460408 SCAF8Q9UPN6 1271 aaKnown RBP4□□□□□ -1.77
RFC4-211ENST00000460408 SH2B3Q9UQQ2 575 aa4□□□□□ -1.77
RFC4-211ENST00000460408 FER1L4A9Z1Z3 1794 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 hCG_1642624A0A1W2PR95 340 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 ASNA1O43681 348 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 ESRRBO95718 433 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 NPPBP16860 134 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 RBL1P28749 1068 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 GPS1Q13098 491 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 GRM1Q13255 1194 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 CLCA4Q14CN2 919 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 ZRSR2Q15696 482 aaKnown RBP3.99□□□□□ -1.77
RFC4-211ENST00000460408 TBCCQ15814 346 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 NBPF8Q3BBV2 869 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 TREML2Q5T2D2 321 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 METTL25Q8N6Q8 603 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 OR1N1Q8NGS0 311 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 SUN3Q8TAQ9 357 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 ATRIPQ8WXE1 791 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 SLC9A6Q92581 669 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 CTHRC1Q96CG8 243 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 WDYHV1Q96HA8 205 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 HIST1H2AAQ96QV6 131 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 HAPLN3Q96S86 360 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 POLR3GLQ9BT43 218 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 ISCA1Q9BUE6 129 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 TMEM120AQ9BXJ8 343 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 ZCWPW1Q9H0M4 648 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 GLOD4Q9HC38 313 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 DACT1Q9NYF0 836 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 EHD3Q9NZN3 535 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 TMOD4Q9NZQ9 345 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 DRG1Q9Y295 367 aaKnown RBP3.99□□□□□ -1.77
RFC4-211ENST00000460408 SLC27A6Q9Y2P4 619 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 PCDHGB3Q9Y5G1 929 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 NISCHQ9Y2I1 1504 aa3.99□□□□□ -1.77
RFC4-211ENST00000460408 COL3A1P02461 1466 aaPredicted RBP3.98□□□□□ -1.77
RFC4-211ENST00000460408 TRIM38O00635 465 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 PEX1O43933 1283 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 CCNT2O60583 730 aaKnown RBP3.98□□□□□ -1.77
RFC4-211ENST00000460408 FESP07332 822 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 CHRM2P08172 466 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 ITPKBP27987 946 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 MPLP40238 635 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 PNLIPRP1P54315 467 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 NHLH1Q02575 133 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 FOXF2Q12947 444 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 MTAPQ13126 283 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 ACOX1Q15067 660 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 CYP1B1Q16678 543 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 LDHAL6AQ6ZMR3 332 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 CAND1Q86VP6 1230 aaKnown RBP3.98□□□□□ -1.77
RFC4-211ENST00000460408 SLC44A3Q8N4M1 653 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 ABHD5Q8WTS1 349 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 R3HDM4Q96D70 268 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 FBXL20Q96IG2 436 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 MYLK2Q9H1R3 596 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 TP63Q9H3D4 680 aaPredicted RBP3.98□□□□□ -1.77
RFC4-211ENST00000460408 TRIM36Q9NQ86 728 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 FSCN3Q9NQT6 498 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 HELLSQ9NRZ9 838 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 LUZP4Q9P127 313 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 LRFN1Q9P244 771 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 GPR52Q9Y2T5 361 aa3.98□□□□□ -1.77
RFC4-211ENST00000460408 SALL3Q9BXA9 1300 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 IPO5O00410 1097 aaKnown RBP3.97□□□□□ -1.77
RFC4-211ENST00000460408 EXOC5O00471 708 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 CREB3O43889 395 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 TJP3O95049 919 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 NXPH3O95157 252 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 ONECUT2O95948 504 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 VIPP01282 170 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 ANXA6P08133 673 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 JUPP14923 745 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 ZFXP17010 805 aaPredicted RBP3.97□□□□□ -1.77
RFC4-211ENST00000460408 PLA2G5P39877 138 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 BMPR2Q13873 1038 aa3.97□□□□□ -1.77
RFC4-211ENST00000460408 JMJD6Q6NYC1 403 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms