RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 FYB2Q5VWT5 728 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 ASRGL1Q7L266 308 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 DPP9Q86TI2 863 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 CCDC125Q86Z20 511 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 MPP5Q8N3R9 675 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 GPRC5AQ8NFJ5 357 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 UTP4Q969X6 686 aaKnown RBP18.86■□□□□ 0.61
HPS3-202ENST00000460120 TRIM6Q9C030 488 aaPredicted RBP18.86■□□□□ 0.61
HPS3-202ENST00000460120 MANSC1Q9H8J5 431 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 GEMIN8Q9NWZ8 242 aaKnown RBP18.86■□□□□ 0.61
HPS3-202ENST00000460120 A0A1B0GUA9 196 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 TRIM49D1C9J1S8 452 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 ALDH3A1P30838 453 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 STIP1P31948 543 aaKnown RBP18.86■□□□□ 0.61
HPS3-202ENST00000460120 SLC8A1P32418 973 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 HDAC4P56524 1084 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 IRX4P78413 519 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 ACVR2BQ13705 512 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 FAM187BQ17R55 369 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 FAM47CQ5HY64 1035 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 PRAMEF19Q5SWL8 479 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 GIMAP7Q8NHV1 300 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 PPTC7Q8NI37 304 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 PRR11Q96HE9 360 aaPredicted RBP18.86■□□□□ 0.61
HPS3-202ENST00000460120 NFKBIZQ9BYH8 718 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 FRMD8P1Q9BZ68 369 aaPredicted RBP18.86■□□□□ 0.61
HPS3-202ENST00000460120 YY1AP1Q9H869 796 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 ZFP69BQ9UJL9 534 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 TEX264Q9Y6I9 313 aa18.86■□□□□ 0.61
HPS3-202ENST00000460120 METTL18O95568 372 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 CYP2F1P24903 491 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 CRADDP78560 199 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 SLC6A3Q01959 620 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 CDHR3Q6ZTQ4 885 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 LINC01465Q8N7H1 131 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 SLC17A6Q9P2U8 582 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 IQANK1A0A1B0GTG1 560 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 NDC80O14777 642 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 TOP3BO95985 862 aaKnown RBP18.85■□□□□ 0.61
HPS3-202ENST00000460120 SMPD1P17405 629 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 EPHB2P29323 1055 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 KHSRPQ92945 711 aaKnown RBP eCLIP18.85■□□□□ 0.61
HPS3-202ENST00000460120 SLC10A4Q96EP9 437 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 DHRS4Q9BTZ2 278 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 TXLNGQ9NUQ3 528 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 ETNK2Q9NVF9 386 aa18.85■□□□□ 0.61
HPS3-202ENST00000460120 ADCY6O43306 1168 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 ANP32DO95626 131 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 GSCP56915 257 aaPredicted RBP18.84■□□□□ 0.61
HPS3-202ENST00000460120 SLC10A2Q12908 348 aaPredicted RBP18.84■□□□□ 0.61
HPS3-202ENST00000460120 UNC5BQ8IZJ1 945 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 CCDC185Q8N715 623 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 OR6J1Q8NGC5 347 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 IQCGQ9H095 443 aaKnown RBP18.84■□□□□ 0.61
HPS3-202ENST00000460120 ZNF395Q9H8N7 513 aaPredicted RBP18.84■□□□□ 0.61
HPS3-202ENST00000460120 VRTNQ9H8Y1 702 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 FBXO6Q9NRD1 293 aaPredicted RBP18.84■□□□□ 0.61
HPS3-202ENST00000460120 CACNG4Q9UBN1 327 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 C2CD2Q9Y426 696 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.84■□□□□ 0.61
HPS3-202ENST00000460120 CFAP69A5D8W1 941 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 PDHXO00330 501 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 SNAI1O95863 264 aaPredicted RBP18.84■□□□□ 0.61
HPS3-202ENST00000460120 ACAP1Q15027 740 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 SOWAHAQ2M3V2 549 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 TRMT10BQ6PF06 316 aaKnown RBP18.84■□□□□ 0.61
HPS3-202ENST00000460120 FAM131BQ86XD5 332 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 N4BP2L2Q92802 583 aaPredicted RBP18.84■□□□□ 0.61
HPS3-202ENST00000460120 TSSK1BQ9BXA7 367 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 PAK5Q9P286 719 aa18.84■□□□□ 0.61
HPS3-202ENST00000460120 A6NJR5 290 aa18.83■□□□□ 0.61
HPS3-202ENST00000460120 ENDOD1O94919 500 aa18.83■□□□□ 0.61
HPS3-202ENST00000460120 CDC25CP30307 473 aa18.83■□□□□ 0.61
HPS3-202ENST00000460120 HOXA11P31270 313 aaPredicted RBP18.83■□□□□ 0.61
HPS3-202ENST00000460120 SNAPC2Q13487 334 aa18.83■□□□□ 0.61
HPS3-202ENST00000460120 ZNF792Q3KQV3 632 aa18.83■□□□□ 0.61
HPS3-202ENST00000460120 C9orf131Q5VYM1 1079 aa18.83■□□□□ 0.61
HPS3-202ENST00000460120 CAND1Q86VP6 1230 aaKnown RBP18.83■□□□□ 0.61
HPS3-202ENST00000460120 LONP2Q86WA8 852 aa18.83■□□□□ 0.61
HPS3-202ENST00000460120 SLC44A1Q8WWI5 657 aa18.83■□□□□ 0.61
HPS3-202ENST00000460120 FAM149B1Q96BN6 582 aa18.83■□□□□ 0.61
HPS3-202ENST00000460120 SMYD2Q9NRG4 433 aa18.83■□□□□ 0.61
HPS3-202ENST00000460120 EIF4E1BA6NMX2 242 aaKnown RBP18.83■□□□□ 0.6
HPS3-202ENST00000460120 H0Y3Z8 333 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 DIAPH2O60879 1101 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 DCTN3O75935 186 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 TROVE2P10155 538 aaKnown RBP eCLIP18.83■□□□□ 0.6
HPS3-202ENST00000460120 KITP10721 976 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 CCNB1P14635 433 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 AMPD1P23109 780 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 MROH9Q5TGP6 573 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 CASC4Q6P4E1 433 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 DENND5BQ6ZUT9 1274 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 PGLYRP2Q96PD5 576 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 KLC2Q9H0B6 622 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 SEPT10Q9P0V9 454 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 MARCOQ9UEW3 520 aaPredicted RBP18.83■□□□□ 0.6
HPS3-202ENST00000460120 TTLL3Q9Y4R7 772 aa18.83■□□□□ 0.6
HPS3-202ENST00000460120 CYB561D2O14569 222 aa18.82■□□□□ 0.6
HPS3-202ENST00000460120 RECQL4O94761 1208 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms