RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 TCF25Q9BQ70 676 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 HERC2P3Q9BVR0 1158 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 SLC4A5Q9BY07 1137 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 ZBP1Q9H171 429 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 PCDH12Q9NPG4 1184 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 METTL5Q9NRN9 209 aaKnown RBP10.82□□□□□ -0.68
USP39-210ENST00000459775 IP6K2Q9UHH9 426 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 NCANO14594 1321 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 ARHGEF37A1IGU5 675 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 OR6C75A6NL08 312 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 DYNC1I1O14576 645 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 XPO1O14980 1071 aaKnown RBP10.82□□□□□ -0.68
USP39-210ENST00000459775 LILRB3O75022 631 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 URODP06132 367 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 USP17L7P0C7H9 530 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 VAMP1P23763 118 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 RFC1P35251 1148 aaPredicted RBP10.82□□□□□ -0.68
USP39-210ENST00000459775 TKTL1P51854 596 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 GSCP56915 257 aaPredicted RBP10.82□□□□□ -0.68
USP39-210ENST00000459775 USP46P62068 366 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 GPR17Q13304 367 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 MESDQ14696 234 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 STILQ15468 1287 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 MGAT5BQ3V5L5 792 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 SH3PXD2AQ5TCZ1 1133 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 DCP1BQ8IZD4 617 aaKnown RBP10.82□□□□□ -0.68
USP39-210ENST00000459775 TPCN2Q8NHX9 752 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 ZNF564Q8TBZ8 553 aaPredicted RBP10.82□□□□□ -0.68
USP39-210ENST00000459775 ARNTL2Q8WYA1 636 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 RFFLQ8WZ73 363 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 SLC39A13Q96H72 371 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 PSMB7Q99436 277 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 MRPL17Q9NRX2 175 aaKnown RBP10.82□□□□□ -0.68
USP39-210ENST00000459775 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 H7C4K7 107 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 PER2O15055 1255 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 GPR37L1O60883 481 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 TCF4P15884 667 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 TFE3P19532 575 aaPredicted RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 PPM1AP35813 382 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 PLA2G4AP47712 749 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 ETF1P62495 437 aaKnown RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 ZNF252P-AS1Q0IIN9 211 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 FAM102AQ5T9C2 384 aaPredicted RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 PPP2R2DQ66LE6 453 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 PLEKHA7Q6IQ23 1121 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 SLC8B1Q6J4K2 584 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 DNAJC24Q6P3W2 148 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 TMEM110Q86TL2 294 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 SPATA18Q8TC71 538 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 LRFN3Q9BTN0 628 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 ADAM33Q9BZ11 813 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 ULBP1Q9BZM6 244 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 LUC7LQ9NQ29 371 aaKnown RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 TRPV5Q9NQA5 729 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 AVENQ9NQS1 362 aaPredicted RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 ENTPD7Q9NQZ7 604 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 IRAK4Q9NWZ3 460 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 ETAA1Q9NY74 926 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 ANAPC7Q9UJX3 599 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 INTUQ9ULD6 942 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 PCDHB5Q9Y5E4 795 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 MYO7AQ13402 2215 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 RECKO95980 971 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 CTSAP10619 480 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 GABRB2P47870 512 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 PITX1P78337 314 aaPredicted RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 CCDC85BQ15834 202 aaPredicted RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 LIN9Q5TKA1 542 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 OLFML1Q6UWY5 402 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 SAMD14Q8IZD0 417 aaPredicted RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 LRRC57Q8N9N7 239 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 NOX5Q96PH1 765 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 CSNK1G1Q9HCP0 422 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 DMAP1Q9NPF5 467 aaPredicted RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 BLOC1S6Q9UL45 172 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 LZTS1Q9Y250 596 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 BACE2Q9Y5Z0 518 aa10.81□□□□□ -0.68
USP39-210ENST00000459775 SPTBN5Q9NRC6 3674 aaKnown RBP10.81□□□□□ -0.68
USP39-210ENST00000459775 A0A0C4DFX4 3053 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 YJEFN3A6XGL0 299 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 E7ENQ6 273 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 ATP1A1P05023 1023 aaKnown RBP10.8□□□□□ -0.68
USP39-210ENST00000459775 CALB1P05937 261 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 KRT3P12035 628 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 ATF6P18850 670 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 ENPP1P22413 925 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 SESN3P58005 492 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 CFAP221Q4G0U5 840 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 C4orf50Q6ZRC1 276 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 DAAM2Q86T65 1068 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 RBM23Q86U06 439 aaKnown RBP10.8□□□□□ -0.68
USP39-210ENST00000459775 GDPD5Q8WTR4 605 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 MCRS1Q96EZ8 462 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 TSGA10Q9BZW7 698 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 KCNH6Q9H252 994 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 CYP4F11Q9HBI6 524 aa10.8□□□□□ -0.68
USP39-210ENST00000459775 LRRC4Q9HBW1 653 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms