RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ADH5P11766 374 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 TKTL1P51854 596 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 GAD2Q05329 585 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 STILQ15468 1287 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 LY6G5CQ5SRR4 150 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 PM20D1Q6GTS8 502 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 PKN3Q6P5Z2 889 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 LCLAT1Q6UWP7 414 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 RRAGAQ7L523 313 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 LONP2Q86WA8 852 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 RUBCNQ92622 972 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 KAT5Q92993 513 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 GBP4Q96PP9 640 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 LRRC4Q9HBW1 653 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 LMBRD1Q9NUN5 540 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 LSM7Q9UK45 103 aaKnown RBP16.94■□□□□ 0.3
COL7A1-203ENST00000459756 SLC8A2Q9UPR5 921 aa16.94■□□□□ 0.3
COL7A1-203ENST00000459756 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.93■□□□□ 0.3
COL7A1-203ENST00000459756 TULP2O00295 520 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 HOXC11O43248 304 aaPredicted RBP16.93■□□□□ 0.3
COL7A1-203ENST00000459756 GREM1O60565 184 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 ZBED1O96006 694 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 CNR2P34972 360 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 FNTBP49356 437 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 DMWDQ09019 674 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 CNGA2Q16280 664 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 TPD52L1Q16890 204 aaPredicted RBP16.93■□□□□ 0.3
COL7A1-203ENST00000459756 BTBD8Q5XKL5 378 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 SYT13Q7L8C5 426 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 CREBRFQ8IUR6 639 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 ARHGEF19Q8IW93 802 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 RBBP8NLQ8NC74 664 aaPredicted RBP16.93■□□□□ 0.3
COL7A1-203ENST00000459756 RPLP0P6Q8NHW5 317 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 UBA3Q8TBC4 463 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 KCTD13Q8WZ19 329 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 TFAP2BQ92481 460 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 WBP2Q969T9 261 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 ACDQ96AP0 544 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 PNKPQ96T60 521 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 SPHK2Q9NRA0 654 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 DACH1Q9UI36 760 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 NUDT5Q9UKK9 219 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.93■□□□□ 0.3
COL7A1-203ENST00000459756 SMG5Q9UPR3 1016 aaKnown RBP16.93■□□□□ 0.3
COL7A1-203ENST00000459756 EP300Q09472 2414 aaPredicted RBP16.93■□□□□ 0.3
COL7A1-203ENST00000459756 OTOGLQ3ZCN5 2332 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 ATG2BQ96BY7 2078 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 KIAA1549LQ6ZVL6 1849 aa16.93■□□□□ 0.3
COL7A1-203ENST00000459756 MYOFQ9NZM1 2061 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 CCDC163A0A0D9SF12 145 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 K7EQS6 105 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 RNF225M0QZC1 329 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-203ENST00000459756 MDM4O15151 490 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 ZNF132P52740 706 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 YWHAGP61981 247 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL7A1-203ENST00000459756 COG7P83436 770 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 DPCR1Q3MIW9 517 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 PREPLQ4J6C6 727 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-203ENST00000459756 PKDCCQ504Y2 493 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 HEATR6Q6AI08 1181 aaKnown RBP16.92■□□□□ 0.3
COL7A1-203ENST00000459756 RSRC2Q7L4I2 434 aaKnown RBP16.92■□□□□ 0.3
COL7A1-203ENST00000459756 ENOSF1Q7L5Y1 443 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 WDR5BQ86VZ2 330 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 IRF2BP1Q8IU81 584 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 SIX6OS1Q8N1H7 587 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 CAMKK1Q8N5S9 505 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 FAM81BQ96LP2 452 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 KREMEN1Q96MU8 473 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 ULBP1Q9BZM6 244 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 THAP9Q9H5L6 903 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 CNTN6Q9UQ52 1028 aa16.92■□□□□ 0.3
COL7A1-203ENST00000459756 A0A0A0MRY4 1105 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 GTPBP10A4D1E9 387 aaKnown RBP16.91■□□□□ 0.3
COL7A1-203ENST00000459756 STC2O76061 302 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 KAT7O95251 611 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 APODP05090 189 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 ERCC5P28715 1186 aaPredicted RBP16.91■□□□□ 0.3
COL7A1-203ENST00000459756 GRIA2P42262 883 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 SLC6A11P48066 632 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 ADIGQ0VDE8 80 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 EFEMP1Q12805 493 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 ANO4Q32M45 955 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 TRIM65Q6PJ69 517 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 GBP6Q6ZN66 633 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 C12orf40Q86WS4 652 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 TMEM25Q86YD3 366 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 MIB1Q86YT6 1006 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 SCML4Q8N228 414 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 USP33Q8TEY7 942 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 SECISBP2LQ93073 1101 aaKnown RBP16.91■□□□□ 0.3
COL7A1-203ENST00000459756 HINFPQ9BQA5 517 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 ZSWIM1Q9BR11 485 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 UBE2TQ9NPD8 197 aaPredicted RBP16.91■□□□□ 0.3
COL7A1-203ENST00000459756 CNGB3Q9NQW8 809 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 ARHGEF4Q9NR80 690 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 MARCH2Q9P0N8 246 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 NCDNQ9UBB6 729 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 RAB23Q9ULC3 237 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms