RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 HOMER3Q9NSC5 361 aa25.49■■□□□ 1.67
U2AF1-204ENST00000459639 AMACRQ9UHK6 382 aa25.49■■□□□ 1.67
U2AF1-204ENST00000459639 CAPN9O14815 690 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 HEXIM1O94992 359 aaKnown RBP25.48■■□□□ 1.67
U2AF1-204ENST00000459639 GJB5O95377 273 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 PPM1AP35813 382 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 MRPS25P82663 173 aaKnown RBP25.48■■□□□ 1.67
U2AF1-204ENST00000459639 OTUD1Q5VV17 481 aaPredicted RBP25.48■■□□□ 1.67
U2AF1-204ENST00000459639 KIAA1841Q6NSI8 718 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 ATAD1Q8NBU5 361 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 FBXO22Q8NEZ5 403 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 AAASQ9NRG9 546 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.48■■□□□ 1.67
U2AF1-204ENST00000459639 PCYOX1Q9UHG3 505 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 NAALADL1Q9UQQ1 740 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 CDY1Q9Y6F8 540 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 GREB1Q4ZG55 1949 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 ARSEP51690 589 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 PDK2Q15119 407 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 TMEM240Q5SV17 173 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 SYPL2Q5VXT5 272 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 VSIG1Q86XK7 387 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 SCAMP5Q8TAC9 235 aa25.48■■□□□ 1.67
U2AF1-204ENST00000459639 SNRNP25Q9BV90 132 aaKnown RBP25.48■■□□□ 1.67
U2AF1-204ENST00000459639 KRT10P13645 584 aa25.47■■□□□ 1.67
U2AF1-204ENST00000459639 TNFRSF8P28908 595 aa25.47■■□□□ 1.67
U2AF1-204ENST00000459639 RDXP35241 583 aaKnown RBP25.47■■□□□ 1.67
U2AF1-204ENST00000459639 GLUD2P49448 558 aa25.47■■□□□ 1.67
U2AF1-204ENST00000459639 DR1Q01658 176 aa25.47■■□□□ 1.67
U2AF1-204ENST00000459639 DSG1Q02413 1049 aa25.47■■□□□ 1.67
U2AF1-204ENST00000459639 RNF19BQ6ZMZ0 732 aa25.47■■□□□ 1.67
U2AF1-204ENST00000459639 DDX53Q86TM3 631 aaKnown RBP25.47■■□□□ 1.67
U2AF1-204ENST00000459639 NUP93Q8N1F7 819 aa25.47■■□□□ 1.67
U2AF1-204ENST00000459639 ERLIN1O75477 346 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 VNN2O95498 520 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 HAPLN1P10915 354 aaPredicted RBP25.46■■□□□ 1.67
U2AF1-204ENST00000459639 NCAM1P13591 858 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 COILP38432 576 aaPredicted RBP25.46■■□□□ 1.67
U2AF1-204ENST00000459639 CLCN6P51797 869 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 EPHB4P54760 987 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 CDH6P55285 790 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 ERMARDQ5T6L9 678 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 KAZNQ674X7 775 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 TTC27Q6P3X3 843 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 CCDC137Q6PK04 289 aaKnown RBP25.46■■□□□ 1.67
U2AF1-204ENST00000459639 MAP7D3Q8IWC1 876 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 PGAP3Q96FM1 320 aaPredicted RBP25.46■■□□□ 1.67
U2AF1-204ENST00000459639 DCLK3Q9C098 648 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 FBXO44Q9H4M3 255 aa25.46■■□□□ 1.67
U2AF1-204ENST00000459639 ZNF638Q14966 1978 aaKnown RBP25.46■■□□□ 1.67
U2AF1-204ENST00000459639 FAM187AA6NFU0 413 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 M0QYT0 321 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 ATXN1P54253 815 aaKnown RBP25.45■■□□□ 1.67
U2AF1-204ENST00000459639 PITX1P78337 314 aaPredicted RBP25.45■■□□□ 1.67
U2AF1-204ENST00000459639 ROR1Q01973 937 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 CCNG2Q16589 344 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 DDR2Q16832 855 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 BSPRYQ5W0U4 402 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 IFT20Q8IY31 132 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 TTC9BQ8N6N2 239 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 FAM71BQ8TC56 605 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 HNRNPLLQ8WVV9 542 aaKnown RBP25.45■■□□□ 1.67
U2AF1-204ENST00000459639 GDF3Q9NR23 364 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 CALCOCO1Q9P1Z2 691 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 STK39Q9UEW8 545 aa25.45■■□□□ 1.67
U2AF1-204ENST00000459639 ZNF487B1APH4 448 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 TTI1O43156 1089 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 ZMYND10O75800 440 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 CD48P09326 243 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 GPR15P49685 360 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 DEUP1Q05D60 604 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 KRT81Q14533 505 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 PSTKQ8IV42 348 aaKnown RBP25.45■■□□□ 1.66
U2AF1-204ENST00000459639 SLC7A14Q8TBB6 771 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 C1orf54Q8WWF1 131 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 HERVK_113Q902F9 699 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 SLCO2A1Q92959 643 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 SPATA17Q96L03 361 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 SLC9A7Q96T83 725 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 HTATIP2Q9BUP3 242 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 CALN1Q9BXU9 219 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 IL37Q9NZH6 218 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 CXXC1Q9P0U4 656 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-204ENST00000459639 SCML2Q9UQR0 700 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 R3HDM2Q9Y2K5 976 aaKnown RBP25.45■■□□□ 1.66
U2AF1-204ENST00000459639 INSL6Q9Y581 213 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 PCDHB12Q9Y5F1 795 aa25.45■■□□□ 1.66
U2AF1-204ENST00000459639 WDR27A2RRH5 827 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 BHMG1C9JSJ3 638 aaPredicted RBP25.44■■□□□ 1.66
U2AF1-204ENST00000459639 YWHAGP61981 247 aaKnown RBP eCLIP25.44■■□□□ 1.66
U2AF1-204ENST00000459639 RPL10AP62906 217 aaKnown RBP25.44■■□□□ 1.66
U2AF1-204ENST00000459639 GUCY2DQ02846 1103 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 ADCY2Q08462 1091 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 IFRD2Q12894 506 aaPredicted RBP25.44■■□□□ 1.66
U2AF1-204ENST00000459639 DPYSL3Q14195 570 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 DPYSL2Q16555 572 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 MGAT5BQ3V5L5 792 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 BBS12Q6ZW61 710 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 FIBCD1Q8N539 461 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 RAB17Q9H0T7 212 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms