RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 SNRNP48Q6IEG0 339 aaKnown RBP12.28□□□□□ -0.44
SYNE2-207ENST00000458046 ARHGEF18Q6ZSZ5 1173 aa12.28□□□□□ -0.44
SYNE2-207ENST00000458046 KLHL29Q96CT2 875 aa12.28□□□□□ -0.44
SYNE2-207ENST00000458046 CHCHD6Q9BRQ6 235 aa12.28□□□□□ -0.44
SYNE2-207ENST00000458046 WDR35Q9P2L0 1181 aa12.28□□□□□ -0.44
SYNE2-207ENST00000458046 SLC9A2Q9UBY0 812 aa12.28□□□□□ -0.44
SYNE2-207ENST00000458046 ZNRF3Q9ULT6 936 aa12.28□□□□□ -0.44
SYNE2-207ENST00000458046 FZD1Q9UP38 647 aa12.28□□□□□ -0.44
SYNE2-207ENST00000458046 STK38LQ9Y2H1 464 aa12.28□□□□□ -0.44
SYNE2-207ENST00000458046 ZNFX1Q9P2E3 1918 aaKnown RBP12.28□□□□□ -0.44
SYNE2-207ENST00000458046 K7ERI5 159 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 FZD6O60353 706 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 RFPL1O75677 317 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 POTEJP0CG39 1038 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 DESP17661 470 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 COPS2P61201 443 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 IFRD2Q12894 506 aaPredicted RBP12.27□□□□□ -0.44
SYNE2-207ENST00000458046 PTP4A2Q12974 167 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 KRT72Q14CN4 511 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 GALNTL6Q49A17 601 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 ACCSLQ4AC99 568 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 HECTD3Q5T447 861 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 PLEKHA7Q6IQ23 1121 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 POMZP3Q6PJE2 187 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 MFSD7Q6UXD7 560 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 BEND5Q7L4P6 421 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 DNAJB7Q7Z6W7 309 aaPredicted RBP12.27□□□□□ -0.44
SYNE2-207ENST00000458046 RDM1Q8NG50 284 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 EXD1Q8NHP7 514 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 PPP1R14CQ8TAE6 165 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 FEZF2Q8TBJ5 459 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 PRCCQ92733 491 aaPredicted RBP12.27□□□□□ -0.44
SYNE2-207ENST00000458046 NIF3L1Q9GZT8 377 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 KIF9Q9HAQ2 790 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 RNF181Q9P0P0 153 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 PPARGC1AQ9UBK2 798 aaKnown RBP12.27□□□□□ -0.44
SYNE2-207ENST00000458046 FBXO40Q9UH90 709 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 SLC30A1Q9Y6M5 507 aa12.27□□□□□ -0.44
SYNE2-207ENST00000458046 EXOC1LA0A1B0GW35 172 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 CFAP73A6NFT4 308 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 A8MUI8 341 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 F8VP50 259 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 SLC8A1P32418 973 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 ALDH5A1P51649 535 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-207ENST00000458046 ARSEP51690 589 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 WDR4P57081 412 aaKnown RBP12.27□□□□□ -0.45
SYNE2-207ENST00000458046 MGAT5Q09328 741 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 BNIP1Q12981 228 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 STAT4Q14765 748 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 EMC2Q15006 297 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 TXNRD3NBQ6F5E7 133 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 ZER1Q7Z7L7 766 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 BBOF1Q8ND07 529 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 SPATA18Q8TC71 538 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 MAGEC3Q8TD91 643 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 ZNF606Q8WXB4 792 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 TEPSINQ96N21 525 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 MSTO1Q9BUK6 570 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 PITPNM3Q9BZ71 974 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 LGALS13Q9UHV8 139 aa12.27□□□□□ -0.45
SYNE2-207ENST00000458046 DICER1Q9UPY3 1922 aaKnown RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 SMAD7O15105 426 aaKnown RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 GUCA1CO95843 209 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 CST3P01034 146 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 KRT1P04264 644 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 KRT16P08779 473 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 TAC1P20366 129 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 CA8P35219 290 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 PSMC4P43686 418 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 NRLP54845 237 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 SP2Q02086 613 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 GPS1Q13098 491 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 SETMARQ53H47 684 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 ABHD15Q6UXT9 468 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 ANKRD35Q8N283 1001 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 AGBL3Q8NEM8 1001 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 MAML1Q92585 1016 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 STAMBPL1Q96FJ0 436 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 MAGEB18Q96M61 343 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 TEX13BQ9BXU2 312 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 PARVAQ9NVD7 372 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 KLHL14Q9P2G3 628 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 PRKAG3Q9UGI9 489 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 TRHDEQ9UKU6 1024 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 GOLGA8SH3BPF8 625 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 GOLGA8MH3BSY2 632 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 LIASO43766 372 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 IFNB1P01574 187 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 EDN1P05305 212 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 PECAM1P16284 738 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 ATP4AP20648 1035 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 NOP14P78316 857 aaKnown RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 DNAJC3Q13217 504 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 ODF1Q14990 250 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 PHF13Q86YI8 300 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 C4orf33Q8N1A6 199 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 ZCCHC9Q8N567 271 aaKnown RBP12.26□□□□□ -0.45
SYNE2-207ENST00000458046 ZNF540Q8NDQ6 660 aa12.26□□□□□ -0.45
SYNE2-207ENST00000458046 DEPTORQ8TB45 409 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms