RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 PQLC3Q8N755 202 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 SLC35F5Q8WV83 523 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 APOPT1Q96IL0 206 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 GPATCH2LQ9NWQ4 482 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.87■□□□□ 0.93
CSPG5-203ENST00000456150 STK38LQ9Y2H1 464 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 HEY1Q9Y5J3 304 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 GOLGA8RI6L899 631 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 MAGEA6P43360 314 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 E2F5Q15329 346 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 UNC93AQ86WB7 457 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 CDKL3Q8IVW4 592 aaPredicted RBP20.87■□□□□ 0.93
CSPG5-203ENST00000456150 LRRC52Q8N7C0 313 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 BEST2Q8NFU1 509 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 TBC1D31Q96DN5 1066 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 LRMDAQ9H2I8 198 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 MANSC1Q9H8J5 431 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 TRIM33Q9UPN9 1127 aa20.87■□□□□ 0.93
CSPG5-203ENST00000456150 C2CD2LO14523 706 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 FGFR1P11362 822 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 RBL1P28749 1068 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 YWHAZP63104 245 aaKnown RBP20.86■□□□□ 0.93
CSPG5-203ENST00000456150 PARP6Q2NL67 630 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 SLC45A4Q5BKX6 768 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 RPAINQ86UA6 219 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 AGGF1Q8N302 714 aaeCLIP20.86■□□□□ 0.93
CSPG5-203ENST00000456150 PCDH19Q8TAB3 1148 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 INPP5DQ92835 1189 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 SNX27Q96L92 541 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 GPBP1L1Q9HC44 474 aaPredicted RBP20.86■□□□□ 0.93
CSPG5-203ENST00000456150 FAM49BQ9NUQ9 324 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 ETNK2Q9NVF9 386 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 SLC17A7Q9P2U7 560 aa20.86■□□□□ 0.93
CSPG5-203ENST00000456150 TOMM70O94826 608 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 PTPN9P43378 593 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 RASSF2P50749 326 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 SLC18A2Q05940 514 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 MARCH8Q5T0T0 291 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 SLC27A1Q6PCB7 646 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 SLC26A11Q86WA9 606 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 CHSY1Q86X52 802 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 ZNF276Q8N554 614 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 LRRC39Q96DD0 335 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 CFAP36Q96G28 342 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 KLF6Q99612 283 aaPredicted RBP20.85■□□□□ 0.93
CSPG5-203ENST00000456150 KATNBL1Q9H079 304 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 YY1AP1Q9H869 796 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 WDR91A4D1P6 747 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 TRDMT1O14717 391 aaKnown RBP20.85■□□□□ 0.93
CSPG5-203ENST00000456150 PAPSS1O43252 624 aaPredicted RBP20.85■□□□□ 0.93
CSPG5-203ENST00000456150 GSTA2P09210 222 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 ZFXP17010 805 aaPredicted RBP20.85■□□□□ 0.93
CSPG5-203ENST00000456150 CCND1P24385 295 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 NEK3P51956 506 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 FAAP100Q0VG06 881 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 TTC39BQ5VTQ0 682 aaPredicted RBP20.85■□□□□ 0.93
CSPG5-203ENST00000456150 ARHGAP17Q68EM7 881 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 SCUBE3Q8IX30 993 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 KHSRPQ92945 711 aaKnown RBP eCLIP20.85■□□□□ 0.93
CSPG5-203ENST00000456150 NPHS2Q9NP85 383 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 SNTG2Q9NY99 539 aa20.85■□□□□ 0.93
CSPG5-203ENST00000456150 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.85■□□□□ 0.93
CSPG5-203ENST00000456150 KIF3CO14782 793 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 STRNO43815 780 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 DHRS4L1P0CG22 281 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 MAP2K2P36507 400 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 HDAC4P56524 1084 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 CDC42EP1Q00587 391 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 RGMBQ6NW40 437 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 NLRP9Q7RTR0 991 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 MCUQ8NE86 351 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 AGAP11Q8TF27 550 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 APBB2Q92870 758 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 TMEM237Q96Q45 408 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 GCOM2Q9BZD3 368 aaPredicted RBP20.84■□□□□ 0.93
CSPG5-203ENST00000456150 NRDE2Q9H7Z3 1164 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 MCM8Q9UJA3 840 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 ZNF180Q9UJW8 692 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 TTLL3Q9Y4R7 772 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 A6NJR5 290 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 AVILO75366 819 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 WFS1O76024 890 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 MMP3P08254 477 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 HOXD8P13378 290 aaPredicted RBP20.84■□□□□ 0.93
CSPG5-203ENST00000456150 CYP2F1P24903 491 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 SCNN1AP37088 669 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 ZBTB6Q15916 424 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 CA9Q16790 459 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 PPP6R3Q5H9R7 873 aaPredicted RBP20.84■□□□□ 0.93
CSPG5-203ENST00000456150 SYCP2LQ5T4T6 812 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 LGSNQ5TDP6 509 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 OR6B3Q8NGW1 331 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 SERAC1Q96JX3 654 aa20.84■□□□□ 0.93
CSPG5-203ENST00000456150 ZC3H7BQ9UGR2 993 aaKnown RBP20.84■□□□□ 0.93
CSPG5-203ENST00000456150 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.83■□□□□ 0.93
CSPG5-203ENST00000456150 RRN3P2A6NIE6 340 aa20.83■□□□□ 0.93
CSPG5-203ENST00000456150 KRT37O76014 449 aa20.83■□□□□ 0.93
CSPG5-203ENST00000456150 TARSP26639 723 aaKnown RBP20.83■□□□□ 0.93
CSPG5-203ENST00000456150 DPYSL2Q16555 572 aa20.83■□□□□ 0.93
CSPG5-203ENST00000456150 KIZQ2M2Z5 673 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms